Gene : AL5G36000 A. lyrata v2.1
Defline:  (1 of 1) K08907 - light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1) Genomic Order:  2300
Name:  ? AL5G36000 Secondary Identifier:  ? PAC:35918318
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G36000 0.5kb upstream 0.5kb upstream 1814   true scaffold_5: 17230477-17232290 Arabidopsis lyrata
AL5G36000 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 17231791-17232290 Arabidopsis lyrata
AL5G36000 0.5kb downstream 0.5kb downstream 1814   true scaffold_5: 17229977-17231790 Arabidopsis lyrata
AL5G36000 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 17229977-17230476 Arabidopsis lyrata
AL5G36000 1.0kb upstream 1.0kb upstream 2314   true scaffold_5: 17230477-17232790 Arabidopsis lyrata
AL5G36000 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 17231791-17232790 Arabidopsis lyrata
AL5G36000 1.0kb downstream 1.0kb downstream 2314   true scaffold_5: 17229477-17231790 Arabidopsis lyrata
AL5G36000 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 17229477-17230476 Arabidopsis lyrata
AL5G36000 2.0kb upstream 2.0kb upstream 3314   true scaffold_5: 17230477-17233790 Arabidopsis lyrata
AL5G36000 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 17231791-17233790 Arabidopsis lyrata
AL5G36000 2.0kb downstream 2.0kb downstream 3314   true scaffold_5: 17228477-17231790 Arabidopsis lyrata
AL5G36000 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 17228477-17230476 Arabidopsis lyrata
AL5G36000 5.0kb upstream 5.0kb upstream 6314   true scaffold_5: 17230477-17236790 Arabidopsis lyrata
AL5G36000 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 17231791-17236790 Arabidopsis lyrata
AL5G36000 5.0kb downstream 5.0kb downstream 6314   true scaffold_5: 17225477-17231790 Arabidopsis lyrata
AL5G36000 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 17225477-17230476 Arabidopsis lyrata
AL5G36000 10.0kb upstream 10.0kb upstream 11314   true scaffold_5: 17230477-17241790 Arabidopsis lyrata
AL5G36000 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 17231791-17241790 Arabidopsis lyrata
AL5G36000 10.0kb downstream 10.0kb downstream 11314   true scaffold_5: 17220477-17231790 Arabidopsis lyrata
AL5G36000 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 17220477-17230476 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374272 5261 Brassicaceae View MSA
123840113 5264 Brassicales-Malvales View MSA
124341032 5266 SBM View MSA
124253562 5268 Malvidae View MSA
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain