Gene : AL5G34510 A. lyrata v2.1

Defline:  (1 of 1) 5.1.1.7 - Diaminopimelate epimerase Genomic Order:  2157
Name:  ? AL5G34510 Secondary Identifier:  ? PAC:35919292

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5097 Arabidopsis lyrata pathologic  
Alyrata PWY-724 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G34510 0.5kb upstream 0.5kb upstream 3039   true scaffold_5: 16642956-16645994 Arabidopsis lyrata
AL5G34510 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 16642956-16643455 Arabidopsis lyrata
AL5G34510 0.5kb downstream 0.5kb downstream 3039   true scaffold_5: 16643456-16646494 Arabidopsis lyrata
AL5G34510 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 16645995-16646494 Arabidopsis lyrata
AL5G34510 1.0kb upstream 1.0kb upstream 3539   true scaffold_5: 16642456-16645994 Arabidopsis lyrata
AL5G34510 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 16642456-16643455 Arabidopsis lyrata
AL5G34510 1.0kb downstream 1.0kb downstream 3539   true scaffold_5: 16643456-16646994 Arabidopsis lyrata
AL5G34510 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 16645995-16646994 Arabidopsis lyrata
AL5G34510 2.0kb upstream 2.0kb upstream 4539   true scaffold_5: 16641456-16645994 Arabidopsis lyrata
AL5G34510 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 16641456-16643455 Arabidopsis lyrata
AL5G34510 2.0kb downstream 2.0kb downstream 4539   true scaffold_5: 16643456-16647994 Arabidopsis lyrata
AL5G34510 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 16645995-16647994 Arabidopsis lyrata
AL5G34510 5.0kb upstream 5.0kb upstream 7539   true scaffold_5: 16638456-16645994 Arabidopsis lyrata
AL5G34510 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 16638456-16643455 Arabidopsis lyrata
AL5G34510 5.0kb downstream 5.0kb downstream 7539   true scaffold_5: 16643456-16650994 Arabidopsis lyrata
AL5G34510 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 16645995-16650994 Arabidopsis lyrata
AL5G34510 10.0kb upstream 10.0kb upstream 12539   true scaffold_5: 16633456-16645994 Arabidopsis lyrata
AL5G34510 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 16633456-16643455 Arabidopsis lyrata
AL5G34510 10.0kb downstream 10.0kb downstream 12539   true scaffold_5: 16643456-16655994 Arabidopsis lyrata
AL5G34510 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 16645995-16655994 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373276 5261 Brassicaceae View MSA
123838616 5264 Brassicales-Malvales View MSA
124341400 5266 SBM View MSA
124243364 5268 Malvidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain