Gene : AL5G38250 A. lyrata v2.1
Defline:  (1 of 1) KOG0148//KOG4205 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Genomic Order:  2518
Name:  ? AL5G38250 Secondary Identifier:  ? PAC:35920767
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G38250 0.5kb upstream 0.5kb upstream 2595   true scaffold_5: 18098403-18100997 Arabidopsis lyrata
AL5G38250 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18100498-18100997 Arabidopsis lyrata
AL5G38250 0.5kb downstream 0.5kb downstream 2595   true scaffold_5: 18097903-18100497 Arabidopsis lyrata
AL5G38250 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18097903-18098402 Arabidopsis lyrata
AL5G38250 1.0kb upstream 1.0kb upstream 3095   true scaffold_5: 18098403-18101497 Arabidopsis lyrata
AL5G38250 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18100498-18101497 Arabidopsis lyrata
AL5G38250 1.0kb downstream 1.0kb downstream 3095   true scaffold_5: 18097403-18100497 Arabidopsis lyrata
AL5G38250 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18097403-18098402 Arabidopsis lyrata
AL5G38250 2.0kb upstream 2.0kb upstream 4095   true scaffold_5: 18098403-18102497 Arabidopsis lyrata
AL5G38250 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18100498-18102497 Arabidopsis lyrata
AL5G38250 2.0kb downstream 2.0kb downstream 4095   true scaffold_5: 18096403-18100497 Arabidopsis lyrata
AL5G38250 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18096403-18098402 Arabidopsis lyrata
AL5G38250 5.0kb upstream 5.0kb upstream 7095   true scaffold_5: 18098403-18105497 Arabidopsis lyrata
AL5G38250 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18100498-18105497 Arabidopsis lyrata
AL5G38250 5.0kb downstream 5.0kb downstream 7095   true scaffold_5: 18093403-18100497 Arabidopsis lyrata
AL5G38250 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18093403-18098402 Arabidopsis lyrata
AL5G38250 10.0kb upstream 10.0kb upstream 12095   true scaffold_5: 18098403-18110497 Arabidopsis lyrata
AL5G38250 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18100498-18110497 Arabidopsis lyrata
AL5G38250 10.0kb downstream 10.0kb downstream 12095   true scaffold_5: 18088403-18100497 Arabidopsis lyrata
AL5G38250 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18088403-18098402 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375081 5261 Brassicaceae View MSA
123840806 5264 Brassicales-Malvales View MSA
124342346 5266 SBM View MSA
124254160 5268 Malvidae View MSA
124069346 5270 Rosid View MSA
123739331 5271 Pentapetalae View MSA
122793015 5272 Eudicot View MSA
122047267 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310718 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain