Gene : AL5G38390 A. lyrata v2.1

Defline:  (1 of 2) PTHR23086:SF37 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4-RELATED Genomic Order:  2531
Name:  ? AL5G38390 Secondary Identifier:  ? PAC:35918606

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G38390 0.5kb upstream 0.5kb upstream 4534   true scaffold_5: 18171161-18175694 Arabidopsis lyrata
AL5G38390 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18171161-18171660 Arabidopsis lyrata
AL5G38390 0.5kb downstream 0.5kb downstream 4534   true scaffold_5: 18171661-18176194 Arabidopsis lyrata
AL5G38390 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18175695-18176194 Arabidopsis lyrata
AL5G38390 1.0kb upstream 1.0kb upstream 5034   true scaffold_5: 18170661-18175694 Arabidopsis lyrata
AL5G38390 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18170661-18171660 Arabidopsis lyrata
AL5G38390 1.0kb downstream 1.0kb downstream 5034   true scaffold_5: 18171661-18176694 Arabidopsis lyrata
AL5G38390 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18175695-18176694 Arabidopsis lyrata
AL5G38390 2.0kb upstream 2.0kb upstream 6034   true scaffold_5: 18169661-18175694 Arabidopsis lyrata
AL5G38390 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18169661-18171660 Arabidopsis lyrata
AL5G38390 2.0kb downstream 2.0kb downstream 6034   true scaffold_5: 18171661-18177694 Arabidopsis lyrata
AL5G38390 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18175695-18177694 Arabidopsis lyrata
AL5G38390 5.0kb upstream 5.0kb upstream 9034   true scaffold_5: 18166661-18175694 Arabidopsis lyrata
AL5G38390 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18166661-18171660 Arabidopsis lyrata
AL5G38390 5.0kb downstream 5.0kb downstream 9034   true scaffold_5: 18171661-18180694 Arabidopsis lyrata
AL5G38390 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18175695-18180694 Arabidopsis lyrata
AL5G38390 10.0kb upstream 10.0kb upstream 14034   true scaffold_5: 18161661-18175694 Arabidopsis lyrata
AL5G38390 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18161661-18171660 Arabidopsis lyrata
AL5G38390 10.0kb downstream 10.0kb downstream 14034   true scaffold_5: 18171661-18185694 Arabidopsis lyrata
AL5G38390 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18175695-18185694 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380989 5261 Brassicaceae View MSA
123839827 5264 Brassicales-Malvales View MSA
124340545 5266 SBM View MSA
124242521 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain