Gene : AL5G40980 A. lyrata v2.1
Defline:  (1 of 5) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  2779
Name:  ? AL5G40980 Secondary Identifier:  ? PAC:35920100
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G40980 0.5kb upstream 0.5kb upstream 3978   true scaffold_5: 19186220-19190197 Arabidopsis lyrata
AL5G40980 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 19186220-19186719 Arabidopsis lyrata
AL5G40980 0.5kb downstream 0.5kb downstream 3978   true scaffold_5: 19186720-19190697 Arabidopsis lyrata
AL5G40980 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 19190198-19190697 Arabidopsis lyrata
AL5G40980 1.0kb upstream 1.0kb upstream 4478   true scaffold_5: 19185720-19190197 Arabidopsis lyrata
AL5G40980 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 19185720-19186719 Arabidopsis lyrata
AL5G40980 1.0kb downstream 1.0kb downstream 4478   true scaffold_5: 19186720-19191197 Arabidopsis lyrata
AL5G40980 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 19190198-19191197 Arabidopsis lyrata
AL5G40980 2.0kb upstream 2.0kb upstream 5478   true scaffold_5: 19184720-19190197 Arabidopsis lyrata
AL5G40980 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 19184720-19186719 Arabidopsis lyrata
AL5G40980 2.0kb downstream 2.0kb downstream 5478   true scaffold_5: 19186720-19192197 Arabidopsis lyrata
AL5G40980 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 19190198-19192197 Arabidopsis lyrata
AL5G40980 5.0kb upstream 5.0kb upstream 8478   true scaffold_5: 19181720-19190197 Arabidopsis lyrata
AL5G40980 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 19181720-19186719 Arabidopsis lyrata
AL5G40980 5.0kb downstream 5.0kb downstream 8478   true scaffold_5: 19186720-19195197 Arabidopsis lyrata
AL5G40980 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 19190198-19195197 Arabidopsis lyrata
AL5G40980 10.0kb upstream 10.0kb upstream 13478   true scaffold_5: 19176720-19190197 Arabidopsis lyrata
AL5G40980 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 19176720-19186719 Arabidopsis lyrata
AL5G40980 10.0kb downstream 10.0kb downstream 13478   true scaffold_5: 19186720-19200197 Arabidopsis lyrata
AL5G40980 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 19190198-19200197 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376451 5261 Brassicaceae View MSA
123830887 5264 Brassicales-Malvales View MSA
124346562 5266 SBM View MSA
124247833 5268 Malvidae View MSA
124063626 5270 Rosid View MSA
123737447 5271 Pentapetalae View MSA
122788593 5272 Eudicot View MSA
122046976 5273 Angiosperm View MSA
121346361 5274 Embryophyte View MSA
123380372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain