Gene : AL5G43960 A. lyrata v2.1

Defline:  (1 of 2) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  3053
Name:  ? AL5G43960 Secondary Identifier:  ? PAC:35918844

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7601 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G43960 0.5kb upstream 0.5kb upstream 2212   true scaffold_5: 20336151-20338362 Arabidopsis lyrata
AL5G43960 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 20336151-20336650 Arabidopsis lyrata
AL5G43960 0.5kb downstream 0.5kb downstream 2212   true scaffold_5: 20336651-20338862 Arabidopsis lyrata
AL5G43960 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 20338363-20338862 Arabidopsis lyrata
AL5G43960 1.0kb upstream 1.0kb upstream 2712   true scaffold_5: 20335651-20338362 Arabidopsis lyrata
AL5G43960 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 20335651-20336650 Arabidopsis lyrata
AL5G43960 1.0kb downstream 1.0kb downstream 2712   true scaffold_5: 20336651-20339362 Arabidopsis lyrata
AL5G43960 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 20338363-20339362 Arabidopsis lyrata
AL5G43960 2.0kb upstream 2.0kb upstream 3712   true scaffold_5: 20334651-20338362 Arabidopsis lyrata
AL5G43960 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 20334651-20336650 Arabidopsis lyrata
AL5G43960 2.0kb downstream 2.0kb downstream 3712   true scaffold_5: 20336651-20340362 Arabidopsis lyrata
AL5G43960 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 20338363-20340362 Arabidopsis lyrata
AL5G43960 5.0kb upstream 5.0kb upstream 6712   true scaffold_5: 20331651-20338362 Arabidopsis lyrata
AL5G43960 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 20331651-20336650 Arabidopsis lyrata
AL5G43960 5.0kb downstream 5.0kb downstream 6712   true scaffold_5: 20336651-20343362 Arabidopsis lyrata
AL5G43960 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 20338363-20343362 Arabidopsis lyrata
AL5G43960 10.0kb upstream 10.0kb upstream 11712   true scaffold_5: 20326651-20338362 Arabidopsis lyrata
AL5G43960 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 20326651-20336650 Arabidopsis lyrata
AL5G43960 10.0kb downstream 10.0kb downstream 11712   true scaffold_5: 20336651-20348362 Arabidopsis lyrata
AL5G43960 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 20338363-20348362 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122366285 5261 Brassicaceae View MSA
123840551 5264 Brassicales-Malvales View MSA
124345527 5266 SBM View MSA
124238408 5268 Malvidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain