Gene : AL5G43160 A. lyrata v2.1
Defline:  (1 of 3) PTHR19321:SF7 - 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 3-RELATED Genomic Order:  2976
Name:  ? AL5G43160 Secondary Identifier:  ? PAC:35920747
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G43160 0.5kb upstream 0.5kb upstream 4016   true scaffold_5: 20058877-20062892 Arabidopsis lyrata
AL5G43160 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 20062393-20062892 Arabidopsis lyrata
AL5G43160 0.5kb downstream 0.5kb downstream 4016   true scaffold_5: 20058377-20062392 Arabidopsis lyrata
AL5G43160 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 20058377-20058876 Arabidopsis lyrata
AL5G43160 1.0kb upstream 1.0kb upstream 4516   true scaffold_5: 20058877-20063392 Arabidopsis lyrata
AL5G43160 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 20062393-20063392 Arabidopsis lyrata
AL5G43160 1.0kb downstream 1.0kb downstream 4516   true scaffold_5: 20057877-20062392 Arabidopsis lyrata
AL5G43160 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 20057877-20058876 Arabidopsis lyrata
AL5G43160 2.0kb upstream 2.0kb upstream 5516   true scaffold_5: 20058877-20064392 Arabidopsis lyrata
AL5G43160 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 20062393-20064392 Arabidopsis lyrata
AL5G43160 2.0kb downstream 2.0kb downstream 5516   true scaffold_5: 20056877-20062392 Arabidopsis lyrata
AL5G43160 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 20056877-20058876 Arabidopsis lyrata
AL5G43160 5.0kb upstream 5.0kb upstream 8516   true scaffold_5: 20058877-20067392 Arabidopsis lyrata
AL5G43160 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 20062393-20067392 Arabidopsis lyrata
AL5G43160 5.0kb downstream 5.0kb downstream 8516   true scaffold_5: 20053877-20062392 Arabidopsis lyrata
AL5G43160 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 20053877-20058876 Arabidopsis lyrata
AL5G43160 10.0kb upstream 10.0kb upstream 13516   true scaffold_5: 20058877-20072392 Arabidopsis lyrata
AL5G43160 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 20062393-20072392 Arabidopsis lyrata
AL5G43160 10.0kb downstream 10.0kb downstream 13516   true scaffold_5: 20048877-20062392 Arabidopsis lyrata
AL5G43160 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 20048877-20058876 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367832 5261 Brassicaceae View MSA
123836376 5264 Brassicales-Malvales View MSA
124322154 5266 SBM View MSA
124254404 5268 Malvidae View MSA
124065672 5270 Rosid View MSA
123746778 5271 Pentapetalae View MSA
122787923 5272 Eudicot View MSA
122048738 5273 Angiosperm View MSA
121350592 5274 Embryophyte View MSA
123428292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain