Gene : AL5G43580 A. lyrata v2.1
Defline:  (1 of 2) PTHR31500:SF10 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  3016
Name:  ? AL5G43580 Secondary Identifier:  ? PAC:35919385
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G43580 0.5kb upstream 0.5kb upstream 2925   true scaffold_5: 20202130-20205054 Arabidopsis lyrata
AL5G43580 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 20204555-20205054 Arabidopsis lyrata
AL5G43580 0.5kb downstream 0.5kb downstream 2925   true scaffold_5: 20201630-20204554 Arabidopsis lyrata
AL5G43580 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 20201630-20202129 Arabidopsis lyrata
AL5G43580 1.0kb upstream 1.0kb upstream 3425   true scaffold_5: 20202130-20205554 Arabidopsis lyrata
AL5G43580 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 20204555-20205554 Arabidopsis lyrata
AL5G43580 1.0kb downstream 1.0kb downstream 3425   true scaffold_5: 20201130-20204554 Arabidopsis lyrata
AL5G43580 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 20201130-20202129 Arabidopsis lyrata
AL5G43580 2.0kb upstream 2.0kb upstream 4425   true scaffold_5: 20202130-20206554 Arabidopsis lyrata
AL5G43580 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 20204555-20206554 Arabidopsis lyrata
AL5G43580 2.0kb downstream 2.0kb downstream 4425   true scaffold_5: 20200130-20204554 Arabidopsis lyrata
AL5G43580 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 20200130-20202129 Arabidopsis lyrata
AL5G43580 5.0kb upstream 5.0kb upstream 7425   true scaffold_5: 20202130-20209554 Arabidopsis lyrata
AL5G43580 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 20204555-20209554 Arabidopsis lyrata
AL5G43580 5.0kb downstream 5.0kb downstream 7425   true scaffold_5: 20197130-20204554 Arabidopsis lyrata
AL5G43580 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 20197130-20202129 Arabidopsis lyrata
AL5G43580 10.0kb upstream 10.0kb upstream 12425   true scaffold_5: 20202130-20214554 Arabidopsis lyrata
AL5G43580 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 20204555-20214554 Arabidopsis lyrata
AL5G43580 10.0kb downstream 10.0kb downstream 12425   true scaffold_5: 20192130-20204554 Arabidopsis lyrata
AL5G43580 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 20192130-20202129 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
122363187 5261 Brassicaceae View MSA
123837536 5264 Brassicales-Malvales View MSA
124342776 5266 SBM View MSA
124237789 5268 Malvidae View MSA
124064168 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain