Gene : AL5G45900 A. lyrata v2.1

Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  3235
Name:  ? AL5G45900 Secondary Identifier:  ? PAC:35919435

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata DETOX1-PWY-1 Arabidopsis lyrata pathologic  
Alyrata PWY-4081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G45900 0.5kb upstream 0.5kb upstream 1915   true scaffold_5: 21038927-21040841 Arabidopsis lyrata
AL5G45900 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 21038927-21039426 Arabidopsis lyrata
AL5G45900 0.5kb downstream 0.5kb downstream 1915   true scaffold_5: 21039427-21041341 Arabidopsis lyrata
AL5G45900 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 21040842-21041341 Arabidopsis lyrata
AL5G45900 1.0kb upstream 1.0kb upstream 2415   true scaffold_5: 21038427-21040841 Arabidopsis lyrata
AL5G45900 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 21038427-21039426 Arabidopsis lyrata
AL5G45900 1.0kb downstream 1.0kb downstream 2415   true scaffold_5: 21039427-21041841 Arabidopsis lyrata
AL5G45900 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 21040842-21041841 Arabidopsis lyrata
AL5G45900 2.0kb upstream 2.0kb upstream 3415   true scaffold_5: 21037427-21040841 Arabidopsis lyrata
AL5G45900 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 21037427-21039426 Arabidopsis lyrata
AL5G45900 2.0kb downstream 2.0kb downstream 3415   true scaffold_5: 21039427-21042841 Arabidopsis lyrata
AL5G45900 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 21040842-21042841 Arabidopsis lyrata
AL5G45900 5.0kb upstream 5.0kb upstream 6415   true scaffold_5: 21034427-21040841 Arabidopsis lyrata
AL5G45900 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 21034427-21039426 Arabidopsis lyrata
AL5G45900 5.0kb downstream 5.0kb downstream 6415   true scaffold_5: 21039427-21045841 Arabidopsis lyrata
AL5G45900 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 21040842-21045841 Arabidopsis lyrata
AL5G45900 10.0kb upstream 10.0kb upstream 11415   true scaffold_5: 21029427-21040841 Arabidopsis lyrata
AL5G45900 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 21029427-21039426 Arabidopsis lyrata
AL5G45900 10.0kb downstream 10.0kb downstream 11415   true scaffold_5: 21039427-21050841 Arabidopsis lyrata
AL5G45900 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 21040842-21050841 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122369317 5261 Brassicaceae View MSA
123836838 5264 Brassicales-Malvales View MSA
124339844 5266 SBM View MSA
124253459 5268 Malvidae View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain