Gene : AL6G14520 A. lyrata v2.1
Defline:  (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) Genomic Order:  423
Name:  ? AL6G14520 Secondary Identifier:  ? PAC:35928077
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G14520 0.5kb upstream 0.5kb upstream 2385   true scaffold_6: 1669529-1671913 Arabidopsis lyrata
AL6G14520 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1671414-1671913 Arabidopsis lyrata
AL6G14520 0.5kb downstream 0.5kb downstream 2385   true scaffold_6: 1669029-1671413 Arabidopsis lyrata
AL6G14520 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1669029-1669528 Arabidopsis lyrata
AL6G14520 1.0kb upstream 1.0kb upstream 2885   true scaffold_6: 1669529-1672413 Arabidopsis lyrata
AL6G14520 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1671414-1672413 Arabidopsis lyrata
AL6G14520 1.0kb downstream 1.0kb downstream 2885   true scaffold_6: 1668529-1671413 Arabidopsis lyrata
AL6G14520 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1668529-1669528 Arabidopsis lyrata
AL6G14520 2.0kb upstream 2.0kb upstream 3885   true scaffold_6: 1669529-1673413 Arabidopsis lyrata
AL6G14520 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1671414-1673413 Arabidopsis lyrata
AL6G14520 2.0kb downstream 2.0kb downstream 3885   true scaffold_6: 1667529-1671413 Arabidopsis lyrata
AL6G14520 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1667529-1669528 Arabidopsis lyrata
AL6G14520 5.0kb upstream 5.0kb upstream 6885   true scaffold_6: 1669529-1676413 Arabidopsis lyrata
AL6G14520 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1671414-1676413 Arabidopsis lyrata
AL6G14520 5.0kb downstream 5.0kb downstream 6885   true scaffold_6: 1664529-1671413 Arabidopsis lyrata
AL6G14520 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1664529-1669528 Arabidopsis lyrata
AL6G14520 10.0kb upstream 10.0kb upstream 11885   true scaffold_6: 1669529-1681413 Arabidopsis lyrata
AL6G14520 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1671414-1681413 Arabidopsis lyrata
AL6G14520 10.0kb downstream 10.0kb downstream 11885   true scaffold_6: 1659529-1671413 Arabidopsis lyrata
AL6G14520 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1659529-1669528 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366179 5261 Brassicaceae View MSA
123835161 5264 Brassicales-Malvales View MSA
124338595 5266 SBM View MSA
124245074 5268 Malvidae View MSA
124071822 5270 Rosid View MSA
123742810 5271 Pentapetalae View MSA
122792687 5272 Eudicot View MSA
122046094 5273 Angiosperm View MSA
121350870 5274 Embryophyte View MSA
123426524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain