Protein Family : SNF7 family protein 124245074

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  28

28 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30065.t000011 (1 of 1) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) R. communis v0.1 7933   30065: 457500-465432
orange1.1g030068m.g (1 of 1) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED C. sinensis v1.1 3843   scaffold00345: 146930-150772
AT5G04850 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) A. thaliana TAIR10 VPS60.2 1875   Chr5: 1408019-1409893
AT3G10640 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) A. thaliana TAIR10 VPS60.1 1737   Chr3: 3323310-3325046
Thhalv10021438m.g (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED E. salsugineum v1.0 1766   scaffold_13: 6042496-6044261
Thhalv10014559m.g (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED E. salsugineum v1.0 1961   scaffold_2: 1351303-1353263
Ciclev10016516m.g (1 of 1) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED C. clementina v1.0 3952   scaffold_2: 3841921-3845872
Lus10008953.g (1 of 4) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED L. usitatissimum v1.0 1774   scaffold1486: 181527-183300
Gorai.009G303200 (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED G. raimondii v2.1 3557   Chr09: 27209374-27212930
Thecc1EG044333 (1 of 1) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) T. cacao v1.1 3246   scaffold_10r: 15957988-15961233
Araha.1623s0011 (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED A. halleri v1.1 1744   Scaffold1623: 29661-31404
Araha.7076s0003 (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED A. halleri v1.1 1549   Scaffold7076: 9567-11115
Cagra.0834s0015 (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED C. grandiflora v1.1 1732   Scaffold834: 53710-55441
Cagra.5249s0024 (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED C. grandiflora v1.1 1901   Scaffold5249: 86855-88755
Brara.C00181 (1 of 3) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED B. rapa FPsc v1.3 1448   A03: 821169-822616
Brara.C03331 (1 of 3) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED B. rapa FPsc v1.3 1570   A03: 16822606-16824175
Bostr.13129s0478 (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED B. stricta v1.2 1997   Scaffold13129: 2211938-2213934
Bostr.19424s0987 (1 of 2) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED B. stricta v1.2 1818   Scaffold19424: 6950623-6952440
SapurV1A.0036s0490 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) S. purpurea v1.0 4089   chr10: 18483271-18487359
Manes.10G060100 (1 of 1) PTHR22761//PTHR22761:SF17 - SNF7 - RELATED M. esculenta v6.1 9105   Chromosome10: 7709104-7718208
AL3G22110 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) A. lyrata v2.1 1861   scaffold_3: 4265549-4267409
AL6G14520 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) A. lyrata v2.1 1885   scaffold_6: 1669529-1671413
Potri.008G018300 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) P. trichocarpa v3.1 2979   Chr08: 970026-973004
Potri.010G242700 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) P. trichocarpa v3.1 3150   Chr10: 21895340-21898489
Podel.08G024000 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) P. deltoides WV94 v2.1 2884   Chr08: 1453507-1456390
Podel.10G249600 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) P. deltoides WV94 v2.1 3129   Chr10: 21164724-21167852
Carub.0006s0376 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) C. rubella v1.1 1861   scaffold_6: 1389763-1391623
Carub.0003s0987 (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) C. rubella v1.1 1742   scaffold_3: 3385367-3387108

28 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Lus10008953 L. usitatissimum v1.0 124245074 SNF7 family protein 1 5268 Malvidae
Bostr.19424s0987.1.p B. stricta v1.2 124245074 SNF7 family protein 2 5268 Malvidae
AL6G14520.t1 A. lyrata v2.1 124245074 SNF7 family protein 2 5268 Malvidae
Potri.010G242700.1.p P. trichocarpa v3.1 124245074 SNF7 family protein 2 5268 Malvidae
Potri.008G018300.1.p P. trichocarpa v3.1 124245074 SNF7 family protein 2 5268 Malvidae
Podel.10G249600.1.p P. deltoides WV94 v2.1 124245074 SNF7 family protein 2 5268 Malvidae
30065.m001146 R. communis v0.1 124245074 SNF7 family protein 1 5268 Malvidae
orange1.1g030068m C. sinensis v1.1 124245074 SNF7 family protein 1 5268 Malvidae
AT5G04850.2 A. thaliana TAIR10 124245074 SNF7 family protein 2 5268 Malvidae
AT3G10640.1 A. thaliana TAIR10 124245074 SNF7 family protein 2 5268 Malvidae
Thhalv10021438m E. salsugineum v1.0 124245074 SNF7 family protein 2 5268 Malvidae
Thhalv10014559m E. salsugineum v1.0 124245074 SNF7 family protein 2 5268 Malvidae
Ciclev10016516m C. clementina v1.0 124245074 SNF7 family protein 1 5268 Malvidae
Gorai.009G303200.1 G. raimondii v2.1 124245074 SNF7 family protein 1 5268 Malvidae
Thecc1EG044333t1 T. cacao v1.1 124245074 SNF7 family protein 1 5268 Malvidae
Araha.1623s0011.1.p A. halleri v1.1 124245074 SNF7 family protein 2 5268 Malvidae
Araha.7076s0003.1.p A. halleri v1.1 124245074 SNF7 family protein 2 5268 Malvidae
Cagra.0834s0015.1.p C. grandiflora v1.1 124245074 SNF7 family protein 2 5268 Malvidae
Cagra.5249s0024.1.p C. grandiflora v1.1 124245074 SNF7 family protein 2 5268 Malvidae
Brara.C03331.1.p B. rapa FPsc v1.3 124245074 SNF7 family protein 2 5268 Malvidae
Brara.C00181.1.p B. rapa FPsc v1.3 124245074 SNF7 family protein 2 5268 Malvidae
Bostr.13129s0478.1.p B. stricta v1.2 124245074 SNF7 family protein 2 5268 Malvidae
SapurV1A.0036s0490.1.p S. purpurea v1.0 124245074 SNF7 family protein 1 5268 Malvidae
Manes.10G060100.1.p M. esculenta v6.1 124245074 SNF7 family protein 1 5268 Malvidae
AL3G22110.t1 A. lyrata v2.1 124245074 SNF7 family protein 2 5268 Malvidae
Podel.08G024000.1.p P. deltoides WV94 v2.1 124245074 SNF7 family protein 2 5268 Malvidae
Carub.0006s0376.1.p C. rubella v1.1 124245074 SNF7 family protein 2 5268 Malvidae
Carub.0003s0987.1.p C. rubella v1.1 124245074 SNF7 family protein 2 5268 Malvidae