Gene : AL6G14090 A. lyrata v2.1

Defline:  (1 of 1) PTHR10044:SF127 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  380
Name:  ? AL6G14090 Secondary Identifier:  ? PAC:35928470

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G14090 0.5kb upstream 0.5kb upstream 5597   true scaffold_6: 1481891-1487487 Arabidopsis lyrata
AL6G14090 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1481891-1482390 Arabidopsis lyrata
AL6G14090 0.5kb downstream 0.5kb downstream 5597   true scaffold_6: 1482391-1487987 Arabidopsis lyrata
AL6G14090 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1487488-1487987 Arabidopsis lyrata
AL6G14090 1.0kb upstream 1.0kb upstream 6097   true scaffold_6: 1481391-1487487 Arabidopsis lyrata
AL6G14090 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1481391-1482390 Arabidopsis lyrata
AL6G14090 1.0kb downstream 1.0kb downstream 6097   true scaffold_6: 1482391-1488487 Arabidopsis lyrata
AL6G14090 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1487488-1488487 Arabidopsis lyrata
AL6G14090 2.0kb upstream 2.0kb upstream 7097   true scaffold_6: 1480391-1487487 Arabidopsis lyrata
AL6G14090 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1480391-1482390 Arabidopsis lyrata
AL6G14090 2.0kb downstream 2.0kb downstream 7097   true scaffold_6: 1482391-1489487 Arabidopsis lyrata
AL6G14090 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1487488-1489487 Arabidopsis lyrata
AL6G14090 5.0kb upstream 5.0kb upstream 10097   true scaffold_6: 1477391-1487487 Arabidopsis lyrata
AL6G14090 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1477391-1482390 Arabidopsis lyrata
AL6G14090 5.0kb downstream 5.0kb downstream 10097   true scaffold_6: 1482391-1492487 Arabidopsis lyrata
AL6G14090 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1487488-1492487 Arabidopsis lyrata
AL6G14090 10.0kb upstream 10.0kb upstream 15097   true scaffold_6: 1472391-1487487 Arabidopsis lyrata
AL6G14090 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1472391-1482390 Arabidopsis lyrata
AL6G14090 10.0kb downstream 10.0kb downstream 15097   true scaffold_6: 1482391-1497487 Arabidopsis lyrata
AL6G14090 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1487488-1497487 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367196 5261 Brassicaceae View MSA
123838809 5264 Brassicales-Malvales View MSA
124338275 5266 SBM View MSA
124245236 5268 Malvidae View MSA
124065463 5270 Rosid View MSA
123737422 5271 Pentapetalae View MSA
122787073 5272 Eudicot View MSA
122041881 5273 Angiosperm View MSA
121350906 5274 Embryophyte View MSA
123381933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain