Gene : AL6G14180 A. lyrata v2.1

Defline:  (1 of 3) PTHR31561:SF24 - 3-KETOACYL-COA SYNTHASE 12-RELATED Genomic Order:  390
Name:  ? AL6G14180 Secondary Identifier:  ? PAC:35927425

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G14180 0.5kb upstream 0.5kb upstream 2180   true scaffold_6: 1524067-1526246 Arabidopsis lyrata
AL6G14180 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1525747-1526246 Arabidopsis lyrata
AL6G14180 0.5kb downstream 0.5kb downstream 2180   true scaffold_6: 1523567-1525746 Arabidopsis lyrata
AL6G14180 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1523567-1524066 Arabidopsis lyrata
AL6G14180 1.0kb upstream 1.0kb upstream 2680   true scaffold_6: 1524067-1526746 Arabidopsis lyrata
AL6G14180 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1525747-1526746 Arabidopsis lyrata
AL6G14180 1.0kb downstream 1.0kb downstream 2680   true scaffold_6: 1523067-1525746 Arabidopsis lyrata
AL6G14180 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1523067-1524066 Arabidopsis lyrata
AL6G14180 2.0kb upstream 2.0kb upstream 3680   true scaffold_6: 1524067-1527746 Arabidopsis lyrata
AL6G14180 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1525747-1527746 Arabidopsis lyrata
AL6G14180 2.0kb downstream 2.0kb downstream 3680   true scaffold_6: 1522067-1525746 Arabidopsis lyrata
AL6G14180 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1522067-1524066 Arabidopsis lyrata
AL6G14180 5.0kb upstream 5.0kb upstream 6680   true scaffold_6: 1524067-1530746 Arabidopsis lyrata
AL6G14180 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1525747-1530746 Arabidopsis lyrata
AL6G14180 5.0kb downstream 5.0kb downstream 6680   true scaffold_6: 1519067-1525746 Arabidopsis lyrata
AL6G14180 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1519067-1524066 Arabidopsis lyrata
AL6G14180 10.0kb upstream 10.0kb upstream 11680   true scaffold_6: 1524067-1535746 Arabidopsis lyrata
AL6G14180 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1525747-1535746 Arabidopsis lyrata
AL6G14180 10.0kb downstream 10.0kb downstream 11680   true scaffold_6: 1514067-1525746 Arabidopsis lyrata
AL6G14180 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1514067-1524066 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377853 5261 Brassicaceae View MSA
123835129 5264 Brassicales-Malvales View MSA
124340522 5266 SBM View MSA
124254150 5268 Malvidae View MSA
124066808 5270 Rosid View MSA
123741597 5271 Pentapetalae View MSA
122795783 5272 Eudicot View MSA
122043715 5273 Angiosperm View MSA
121310174 5274 Embryophyte View MSA
123347739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain