Gene : AL6G13760 A. lyrata v2.1

Defline:  (1 of 2) K00284 - glutamate synthase (ferredoxin) (E1.4.7.1) Genomic Order:  349
Name:  ? AL6G13760 Secondary Identifier:  ? PAC:35926946

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CITRULBIO-PWY Arabidopsis lyrata pathologic  
Alyrata GLUTAMINDEG-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3282 Arabidopsis lyrata pathologic  
Alyrata PWY-4341 Arabidopsis lyrata pathologic  
Alyrata PWY-6549 Arabidopsis lyrata pathologic  
Alyrata PWY-6964 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G13760 0.5kb upstream 0.5kb upstream 8971   true scaffold_6: 1337795-1346765 Arabidopsis lyrata
AL6G13760 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1337795-1338294 Arabidopsis lyrata
AL6G13760 0.5kb downstream 0.5kb downstream 8971   true scaffold_6: 1338295-1347265 Arabidopsis lyrata
AL6G13760 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1346766-1347265 Arabidopsis lyrata
AL6G13760 1.0kb upstream 1.0kb upstream 9471   true scaffold_6: 1337295-1346765 Arabidopsis lyrata
AL6G13760 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1337295-1338294 Arabidopsis lyrata
AL6G13760 1.0kb downstream 1.0kb downstream 9471   true scaffold_6: 1338295-1347765 Arabidopsis lyrata
AL6G13760 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1346766-1347765 Arabidopsis lyrata
AL6G13760 2.0kb upstream 2.0kb upstream 10471   true scaffold_6: 1336295-1346765 Arabidopsis lyrata
AL6G13760 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1336295-1338294 Arabidopsis lyrata
AL6G13760 2.0kb downstream 2.0kb downstream 10471   true scaffold_6: 1338295-1348765 Arabidopsis lyrata
AL6G13760 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1346766-1348765 Arabidopsis lyrata
AL6G13760 5.0kb upstream 5.0kb upstream 13471   true scaffold_6: 1333295-1346765 Arabidopsis lyrata
AL6G13760 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1333295-1338294 Arabidopsis lyrata
AL6G13760 5.0kb downstream 5.0kb downstream 13471   true scaffold_6: 1338295-1351765 Arabidopsis lyrata
AL6G13760 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1346766-1351765 Arabidopsis lyrata
AL6G13760 10.0kb upstream 10.0kb upstream 18471   true scaffold_6: 1328295-1346765 Arabidopsis lyrata
AL6G13760 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1328295-1338294 Arabidopsis lyrata
AL6G13760 10.0kb downstream 10.0kb downstream 18471   true scaffold_6: 1338295-1356765 Arabidopsis lyrata
AL6G13760 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1346766-1356765 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041031 5273 Angiosperm View MSA
122374440 5261 Brassicaceae View MSA
123831579 5264 Brassicales-Malvales View MSA
124341671 5266 SBM View MSA
124239263 5268 Malvidae View MSA
124064283 5270 Rosid View MSA
123736436 5271 Pentapetalae View MSA
122793515 5272 Eudicot View MSA
121351458 5274 Embryophyte View MSA
123425051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain