Gene : AL6G12740 A. lyrata v2.1

Defline:  (1 of 1) K04683 - transcription factor Dp-1 (TFDP1) Genomic Order:  255
Name:  ? AL6G12740 Secondary Identifier:  ? PAC:35927298

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G12740 0.5kb upstream 0.5kb upstream 3484   true scaffold_6: 979333-982816 Arabidopsis lyrata
AL6G12740 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 979333-979832 Arabidopsis lyrata
AL6G12740 0.5kb downstream 0.5kb downstream 3484   true scaffold_6: 979833-983316 Arabidopsis lyrata
AL6G12740 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 982817-983316 Arabidopsis lyrata
AL6G12740 1.0kb upstream 1.0kb upstream 3984   true scaffold_6: 978833-982816 Arabidopsis lyrata
AL6G12740 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 978833-979832 Arabidopsis lyrata
AL6G12740 1.0kb downstream 1.0kb downstream 3984   true scaffold_6: 979833-983816 Arabidopsis lyrata
AL6G12740 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 982817-983816 Arabidopsis lyrata
AL6G12740 2.0kb upstream 2.0kb upstream 4984   true scaffold_6: 977833-982816 Arabidopsis lyrata
AL6G12740 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 977833-979832 Arabidopsis lyrata
AL6G12740 2.0kb downstream 2.0kb downstream 4984   true scaffold_6: 979833-984816 Arabidopsis lyrata
AL6G12740 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 982817-984816 Arabidopsis lyrata
AL6G12740 5.0kb upstream 5.0kb upstream 7984   true scaffold_6: 974833-982816 Arabidopsis lyrata
AL6G12740 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 974833-979832 Arabidopsis lyrata
AL6G12740 5.0kb downstream 5.0kb downstream 7984   true scaffold_6: 979833-987816 Arabidopsis lyrata
AL6G12740 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 982817-987816 Arabidopsis lyrata
AL6G12740 10.0kb upstream 10.0kb upstream 12984   true scaffold_6: 969833-982816 Arabidopsis lyrata
AL6G12740 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 969833-979832 Arabidopsis lyrata
AL6G12740 10.0kb downstream 10.0kb downstream 12984   true scaffold_6: 979833-992816 Arabidopsis lyrata
AL6G12740 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 982817-992816 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372141 5261 Brassicaceae View MSA
123839109 5264 Brassicales-Malvales View MSA
124336840 5266 SBM View MSA
124246539 5268 Malvidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain