Gene : AL6G16200 A. lyrata v2.1
Defline:  (1 of 4) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  584
Name:  ? AL6G16200 Secondary Identifier:  ? PAC:35926087
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G16200 0.5kb upstream 0.5kb upstream 1545   true scaffold_6: 2309651-2311195 Arabidopsis lyrata
AL6G16200 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 2309651-2310150 Arabidopsis lyrata
AL6G16200 0.5kb downstream 0.5kb downstream 1545   true scaffold_6: 2310151-2311695 Arabidopsis lyrata
AL6G16200 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 2311196-2311695 Arabidopsis lyrata
AL6G16200 1.0kb upstream 1.0kb upstream 2045   true scaffold_6: 2309151-2311195 Arabidopsis lyrata
AL6G16200 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 2309151-2310150 Arabidopsis lyrata
AL6G16200 1.0kb downstream 1.0kb downstream 2045   true scaffold_6: 2310151-2312195 Arabidopsis lyrata
AL6G16200 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 2311196-2312195 Arabidopsis lyrata
AL6G16200 2.0kb upstream 2.0kb upstream 3045   true scaffold_6: 2308151-2311195 Arabidopsis lyrata
AL6G16200 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 2308151-2310150 Arabidopsis lyrata
AL6G16200 2.0kb downstream 2.0kb downstream 3045   true scaffold_6: 2310151-2313195 Arabidopsis lyrata
AL6G16200 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 2311196-2313195 Arabidopsis lyrata
AL6G16200 5.0kb upstream 5.0kb upstream 6045   true scaffold_6: 2305151-2311195 Arabidopsis lyrata
AL6G16200 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 2305151-2310150 Arabidopsis lyrata
AL6G16200 5.0kb downstream 5.0kb downstream 6045   true scaffold_6: 2310151-2316195 Arabidopsis lyrata
AL6G16200 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 2311196-2316195 Arabidopsis lyrata
AL6G16200 10.0kb upstream 10.0kb upstream 11045   true scaffold_6: 2300151-2311195 Arabidopsis lyrata
AL6G16200 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 2300151-2310150 Arabidopsis lyrata
AL6G16200 10.0kb downstream 10.0kb downstream 11045   true scaffold_6: 2310151-2321195 Arabidopsis lyrata
AL6G16200 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 2311196-2321195 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343115 5261 Brassicaceae View MSA
123840781 5264 Brassicales-Malvales View MSA
124340578 5266 SBM View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain