Gene : AL6G16100 A. lyrata v2.1

Defline:  (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN Genomic Order:  574
Name:  ? AL6G16100 Secondary Identifier:  ? PAC:35927609

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G16100 0.5kb upstream 0.5kb upstream 2577   true scaffold_6: 2269820-2272396 Arabidopsis lyrata
AL6G16100 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 2271897-2272396 Arabidopsis lyrata
AL6G16100 0.5kb downstream 0.5kb downstream 2577   true scaffold_6: 2269320-2271896 Arabidopsis lyrata
AL6G16100 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 2269320-2269819 Arabidopsis lyrata
AL6G16100 1.0kb upstream 1.0kb upstream 3077   true scaffold_6: 2269820-2272896 Arabidopsis lyrata
AL6G16100 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 2271897-2272896 Arabidopsis lyrata
AL6G16100 1.0kb downstream 1.0kb downstream 3077   true scaffold_6: 2268820-2271896 Arabidopsis lyrata
AL6G16100 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 2268820-2269819 Arabidopsis lyrata
AL6G16100 2.0kb upstream 2.0kb upstream 4077   true scaffold_6: 2269820-2273896 Arabidopsis lyrata
AL6G16100 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 2271897-2273896 Arabidopsis lyrata
AL6G16100 2.0kb downstream 2.0kb downstream 4077   true scaffold_6: 2267820-2271896 Arabidopsis lyrata
AL6G16100 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 2267820-2269819 Arabidopsis lyrata
AL6G16100 5.0kb upstream 5.0kb upstream 7077   true scaffold_6: 2269820-2276896 Arabidopsis lyrata
AL6G16100 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 2271897-2276896 Arabidopsis lyrata
AL6G16100 5.0kb downstream 5.0kb downstream 7077   true scaffold_6: 2264820-2271896 Arabidopsis lyrata
AL6G16100 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 2264820-2269819 Arabidopsis lyrata
AL6G16100 10.0kb upstream 10.0kb upstream 12077   true scaffold_6: 2269820-2281896 Arabidopsis lyrata
AL6G16100 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 2271897-2281896 Arabidopsis lyrata
AL6G16100 10.0kb downstream 10.0kb downstream 12077   true scaffold_6: 2259820-2271896 Arabidopsis lyrata
AL6G16100 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 2259820-2269819 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370313 5261 Brassicaceae View MSA
123833876 5264 Brassicales-Malvales View MSA
124338740 5266 SBM View MSA
124237903 5268 Malvidae View MSA
124069527 5270 Rosid View MSA
123737548 5271 Pentapetalae View MSA
122792057 5272 Eudicot View MSA
122048573 5273 Angiosperm View MSA
121345150 5274 Embryophyte View MSA
123426769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain