Gene : AL6G15440 A. lyrata v2.1

Defline:  (1 of 2) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR Genomic Order:  513
Name:  ? AL6G15440 Secondary Identifier:  ? PAC:35928840

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G15440 0.5kb upstream 0.5kb upstream 2201   true scaffold_6: 2015880-2018080 Arabidopsis lyrata
AL6G15440 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 2017581-2018080 Arabidopsis lyrata
AL6G15440 0.5kb downstream 0.5kb downstream 2201   true scaffold_6: 2015380-2017580 Arabidopsis lyrata
AL6G15440 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 2015380-2015879 Arabidopsis lyrata
AL6G15440 1.0kb upstream 1.0kb upstream 2701   true scaffold_6: 2015880-2018580 Arabidopsis lyrata
AL6G15440 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 2017581-2018580 Arabidopsis lyrata
AL6G15440 1.0kb downstream 1.0kb downstream 2701   true scaffold_6: 2014880-2017580 Arabidopsis lyrata
AL6G15440 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 2014880-2015879 Arabidopsis lyrata
AL6G15440 2.0kb upstream 2.0kb upstream 3701   true scaffold_6: 2015880-2019580 Arabidopsis lyrata
AL6G15440 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 2017581-2019580 Arabidopsis lyrata
AL6G15440 2.0kb downstream 2.0kb downstream 3701   true scaffold_6: 2013880-2017580 Arabidopsis lyrata
AL6G15440 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 2013880-2015879 Arabidopsis lyrata
AL6G15440 5.0kb upstream 5.0kb upstream 6701   true scaffold_6: 2015880-2022580 Arabidopsis lyrata
AL6G15440 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 2017581-2022580 Arabidopsis lyrata
AL6G15440 5.0kb downstream 5.0kb downstream 6701   true scaffold_6: 2010880-2017580 Arabidopsis lyrata
AL6G15440 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 2010880-2015879 Arabidopsis lyrata
AL6G15440 10.0kb upstream 10.0kb upstream 11701   true scaffold_6: 2015880-2027580 Arabidopsis lyrata
AL6G15440 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 2017581-2027580 Arabidopsis lyrata
AL6G15440 10.0kb downstream 10.0kb downstream 11701   true scaffold_6: 2005880-2017580 Arabidopsis lyrata
AL6G15440 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 2005880-2015879 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361123 5261 Brassicaceae View MSA
123834886 5264 Brassicales-Malvales View MSA
124321976 5266 SBM View MSA
124249777 5268 Malvidae View MSA
124073016 5270 Rosid View MSA
123747024 5271 Pentapetalae View MSA
122797594 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain