Protein Family : sequence-specific DNA binding transcription factors 124249777

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  42

42 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29814.t000028 (1 of 1) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR R. communis v0.1 1093   29814: 194672-195764
29900.t000090 (1 of 19) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain R. communis v0.1 4496   29900: 585975-590470
orange1.1g021525m.g (1 of 16) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain C. sinensis v1.1 3348   scaffold00007: 696449-699796
AT5G05550 (1 of 2) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR A. thaliana TAIR10 1575   Chr5: 1639032-1640606
AT3G11100 (1 of 2) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR A. thaliana TAIR10 1219   Chr3: 3476187-3477405
AT3G58630 (1 of 22) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain A. thaliana TAIR10 2374   Chr3: 21683568-21685941
Thhalv10021383m.g (1 of 1) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR E. salsugineum v1.0 1458   scaffold_13: 5866774-5868231
Thhalv10006105m.g (1 of 18) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain E. salsugineum v1.0 2610   scaffold_19: 1700319-1702928
Ciclev10016016m.g (1 of 18) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain C. clementina v1.0 3255   scaffold_2: 34195933-34199187
Lus10025406.g (1 of 32) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain L. usitatissimum v1.0 867   scaffold46: 490192-491058
Lus10025404.g (1 of 32) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain L. usitatissimum v1.0 886   scaffold46: 486633-487518
Lus10007273.g (1 of 32) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain L. usitatissimum v1.0 930   scaffold859: 11417-12346
Gorai.011G039600 (1 of 31) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain G. raimondii v2.1 5083   Chr11: 2958973-2964055
Thecc1EG042467 (1 of 1) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR T. cacao v1.1 2355   scaffold_10r: 661737-664091
Thecc1EG029695 (1 of 19) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain T. cacao v1.1 4742   scaffold_6: 23891851-23896592
Araha.12216s0003 (1 of 2) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR A. halleri v1.1 1064   Scaffold12216: 5557-6620
Cagra.0686s0075 (1 of 20) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain C. grandiflora v1.1 2553   Scaffold686: 250556-253108
Cagra.1504s0056 (1 of 1) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR C. grandiflora v1.1 1635   Scaffold1504: 179886-181520
Brara.A03423 (1 of 3) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR B. rapa FPsc v1.3 1344   A01: 28103460-28104803
Brara.I04039 (1 of 34) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain B. rapa FPsc v1.3 1960   A09: 36476994-36478953
Brara.E02958 (1 of 3) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR B. rapa FPsc v1.3 1556   A05: 24923213-24924768
Bostr.19424s1046 (1 of 2) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR B. stricta v1.2 1425   Scaffold19424: 7266474-7267898
Bostr.20903s0103 (1 of 21) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain B. stricta v1.2 2586   Scaffold20903: 474559-477144
SapurV1A.0650s0110 (1 of 1) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR S. purpurea v1.0 2032   Scaffold0650: 101405-103436
SapurV1A.0260s0280 (1 of 34) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain S. purpurea v1.0 1818   chr01: 7783466-7785283
SapurV1A.0045s0480 (1 of 34) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain S. purpurea v1.0 1836   chr03: 10447182-10449017
Manes.08G085700 (1 of 4) PTHR31307:SF4 - 6B-INTERACTING PROTEIN 1-LIKE 1-RELATED M. esculenta v6.1 2158   Chromosome08: 21025585-21027742
Manes.16G040100 (1 of 31) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain M. esculenta v6.1 2941   Chromosome16: 4995443-4998383
Manes.17G056000 (1 of 31) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain M. esculenta v6.1 1472   Chromosome17: 19384070-19385541
AL3G22640 (1 of 2) PTHR31307:SF9 - SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR A. lyrata v2.1 1615   scaffold_3: 4456763-4458377

42 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29814.m000741 R. communis v0.1 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
AT5G05550.2 A. thaliana TAIR10 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
Lus10007273 L. usitatissimum v1.0 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
Araha.12216s0003.1.p A. halleri v1.1 124249777 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Cagra.0686s0075.1.p C. grandiflora v1.1 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Cagra.1504s0056.1.p C. grandiflora v1.1 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Brara.E02958.1.p B. rapa FPsc v1.3 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
SapurV1A.0650s0110.1.p S. purpurea v1.0 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
SapurV1A.0260s0280.1.p S. purpurea v1.0 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
SapurV1A.0045s0480.1.p S. purpurea v1.0 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
Manes.16G040100.1.p M. esculenta v6.1 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
AL5G40390.t1 A. lyrata v2.1 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
AL6G15440.t1 A. lyrata v2.1 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
AL3G22640.t1 A. lyrata v2.1 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
Podel.08G086400.1.p P. deltoides WV94 v2.1 124249777 sequence-specific DNA binding transcription factors 4 5268 Malvidae
Podel.T224200.1.p P. deltoides WV94 v2.1 124249777 sequence-specific DNA binding transcription factors 4 5268 Malvidae
Carub.0006s0445.1.p C. rubella v1.1 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
29900.m001628 R. communis v0.1 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
orange1.1g021525m C. sinensis v1.1 124249777 sequence-specific DNA binding transcription factors 1 5268 Malvidae
AT3G11100.1 A. thaliana TAIR10 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
AT3G58630.1 A. thaliana TAIR10 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
Thhalv10006105m E. salsugineum v1.0 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Thhalv10021383m E. salsugineum v1.0 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Ciclev10016016m C. clementina v1.0 124249777 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Lus10025404 L. usitatissimum v1.0 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
Lus10025406 L. usitatissimum v1.0 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae
Gorai.011G039600.1 G. raimondii v2.1 124249777 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Thecc1EG029695t1 T. cacao v1.1 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Thecc1EG042467t1 T. cacao v1.1 124249777 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Brara.A03423.1.p B. rapa FPsc v1.3 124249777 sequence-specific DNA binding transcription factors 3 5268 Malvidae