Gene : Cagra.0686s0075 C. grandiflora v1.1
Defline:  (1 of 20) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Genomic Order:  75
Name:  ? Cagra.0686s0075 Secondary Identifier:  ? PAC:28901015
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0075 0.5kb upstream 0.5kb upstream 3053 true Scaffold686: 250556-253608 Capsella grandiflora
Cagra.0686s0075 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 253109-253608 Capsella grandiflora
Cagra.0686s0075 0.5kb downstream 0.5kb downstream 3053 true Scaffold686: 250056-253108 Capsella grandiflora
Cagra.0686s0075 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 250056-250555 Capsella grandiflora
Cagra.0686s0075 1.0kb upstream 1.0kb upstream 3553 true Scaffold686: 250556-254108 Capsella grandiflora
Cagra.0686s0075 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 253109-254108 Capsella grandiflora
Cagra.0686s0075 1.0kb downstream 1.0kb downstream 3553 true Scaffold686: 249556-253108 Capsella grandiflora
Cagra.0686s0075 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 249556-250555 Capsella grandiflora
Cagra.0686s0075 2.0kb upstream 2.0kb upstream 4553 true Scaffold686: 250556-255108 Capsella grandiflora
Cagra.0686s0075 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 253109-255108 Capsella grandiflora
Cagra.0686s0075 2.0kb downstream 2.0kb downstream 4553 true Scaffold686: 248556-253108 Capsella grandiflora
Cagra.0686s0075 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 248556-250555 Capsella grandiflora
Cagra.0686s0075 5.0kb upstream 5.0kb upstream 7553 true Scaffold686: 250556-258108 Capsella grandiflora
Cagra.0686s0075 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 253109-258108 Capsella grandiflora
Cagra.0686s0075 5.0kb downstream 5.0kb downstream 7553 true Scaffold686: 245556-253108 Capsella grandiflora
Cagra.0686s0075 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 245556-250555 Capsella grandiflora
Cagra.0686s0075 10.0kb upstream 10.0kb upstream 12553 true Scaffold686: 250556-263108 Capsella grandiflora
Cagra.0686s0075 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 253109-263108 Capsella grandiflora
Cagra.0686s0075 10.0kb downstream 10.0kb downstream 12553 true Scaffold686: 240556-253108 Capsella grandiflora
Cagra.0686s0075 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 240556-250555 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369467 5261 Brassicaceae View MSA
123832360 5264 Brassicales-Malvales View MSA
124345736 5266 SBM View MSA
124249777 5268 Malvidae View MSA
124073016 5270 Rosid View MSA
123747024 5271 Pentapetalae View MSA
122797594 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain