Gene : AL6G19750 A. lyrata v2.1

Defline:  (1 of 1) PTHR11709:SF88 - LACCASE-14 Genomic Order:  918
Name:  ? AL6G19750 Secondary Identifier:  ? PAC:35928858

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G19750 0.5kb upstream 0.5kb upstream 2955   true scaffold_6: 3717867-3720821 Arabidopsis lyrata
AL6G19750 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 3720322-3720821 Arabidopsis lyrata
AL6G19750 0.5kb downstream 0.5kb downstream 2955   true scaffold_6: 3717367-3720321 Arabidopsis lyrata
AL6G19750 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 3717367-3717866 Arabidopsis lyrata
AL6G19750 1.0kb upstream 1.0kb upstream 3455   true scaffold_6: 3717867-3721321 Arabidopsis lyrata
AL6G19750 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 3720322-3721321 Arabidopsis lyrata
AL6G19750 1.0kb downstream 1.0kb downstream 3455   true scaffold_6: 3716867-3720321 Arabidopsis lyrata
AL6G19750 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 3716867-3717866 Arabidopsis lyrata
AL6G19750 2.0kb upstream 2.0kb upstream 4455   true scaffold_6: 3717867-3722321 Arabidopsis lyrata
AL6G19750 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 3720322-3722321 Arabidopsis lyrata
AL6G19750 2.0kb downstream 2.0kb downstream 4455   true scaffold_6: 3715867-3720321 Arabidopsis lyrata
AL6G19750 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 3715867-3717866 Arabidopsis lyrata
AL6G19750 5.0kb upstream 5.0kb upstream 7455   true scaffold_6: 3717867-3725321 Arabidopsis lyrata
AL6G19750 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 3720322-3725321 Arabidopsis lyrata
AL6G19750 5.0kb downstream 5.0kb downstream 7455   true scaffold_6: 3712867-3720321 Arabidopsis lyrata
AL6G19750 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 3712867-3717866 Arabidopsis lyrata
AL6G19750 10.0kb upstream 10.0kb upstream 12455   true scaffold_6: 3717867-3730321 Arabidopsis lyrata
AL6G19750 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 3720322-3730321 Arabidopsis lyrata
AL6G19750 10.0kb downstream 10.0kb downstream 12455   true scaffold_6: 3707867-3720321 Arabidopsis lyrata
AL6G19750 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 3707867-3717866 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370011 5261 Brassicaceae View MSA
123799883 5264 Brassicales-Malvales View MSA
124297361 5266 SBM View MSA
124253162 5268 Malvidae View MSA
124074925 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain