Gene : AL6G20620 A. lyrata v2.1

Defline:  (1 of 4) PTHR31614:SF5 - ALLERGEN-LIKE PROTEIN BRSN20-RELATED Genomic Order:  1002
Name:  ? AL6G20620 Secondary Identifier:  ? PAC:35926787

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G20620 0.5kb upstream 0.5kb upstream 1543   true scaffold_6: 4037456-4038998 Arabidopsis lyrata
AL6G20620 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 4038499-4038998 Arabidopsis lyrata
AL6G20620 0.5kb downstream 0.5kb downstream 1543   true scaffold_6: 4036956-4038498 Arabidopsis lyrata
AL6G20620 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 4036956-4037455 Arabidopsis lyrata
AL6G20620 1.0kb upstream 1.0kb upstream 2043   true scaffold_6: 4037456-4039498 Arabidopsis lyrata
AL6G20620 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 4038499-4039498 Arabidopsis lyrata
AL6G20620 1.0kb downstream 1.0kb downstream 2043   true scaffold_6: 4036456-4038498 Arabidopsis lyrata
AL6G20620 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 4036456-4037455 Arabidopsis lyrata
AL6G20620 2.0kb upstream 2.0kb upstream 3043   true scaffold_6: 4037456-4040498 Arabidopsis lyrata
AL6G20620 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 4038499-4040498 Arabidopsis lyrata
AL6G20620 2.0kb downstream 2.0kb downstream 3043   true scaffold_6: 4035456-4038498 Arabidopsis lyrata
AL6G20620 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 4035456-4037455 Arabidopsis lyrata
AL6G20620 5.0kb upstream 5.0kb upstream 6043   true scaffold_6: 4037456-4043498 Arabidopsis lyrata
AL6G20620 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 4038499-4043498 Arabidopsis lyrata
AL6G20620 5.0kb downstream 5.0kb downstream 6043   true scaffold_6: 4032456-4038498 Arabidopsis lyrata
AL6G20620 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 4032456-4037455 Arabidopsis lyrata
AL6G20620 10.0kb upstream 10.0kb upstream 11043   true scaffold_6: 4037456-4048498 Arabidopsis lyrata
AL6G20620 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 4038499-4048498 Arabidopsis lyrata
AL6G20620 10.0kb downstream 10.0kb downstream 11043   true scaffold_6: 4027456-4038498 Arabidopsis lyrata
AL6G20620 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 4027456-4037455 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376238 5261 Brassicaceae View MSA
123833018 5264 Brassicales-Malvales View MSA
124342193 5266 SBM View MSA
124252589 5268 Malvidae View MSA
124073821 5270 Rosid View MSA
123742086 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain