Gene : AL6G17740 A. lyrata v2.1

Defline:  (1 of 3) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase Genomic Order:  730
Name:  ? AL6G17740 Secondary Identifier:  ? PAC:35927162

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ARGININE-SYN4-PWY Arabidopsis lyrata pathologic  
Alyrata GLUDEG-I-PWY Arabidopsis lyrata pathologic  
Alyrata GLUTAMATE-DEG1-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G17740 0.5kb upstream 0.5kb upstream 2855   true scaffold_6: 2908630-2911484 Arabidopsis lyrata
AL6G17740 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 2908630-2909129 Arabidopsis lyrata
AL6G17740 0.5kb downstream 0.5kb downstream 2855   true scaffold_6: 2909130-2911984 Arabidopsis lyrata
AL6G17740 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 2911485-2911984 Arabidopsis lyrata
AL6G17740 1.0kb upstream 1.0kb upstream 3355   true scaffold_6: 2908130-2911484 Arabidopsis lyrata
AL6G17740 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 2908130-2909129 Arabidopsis lyrata
AL6G17740 1.0kb downstream 1.0kb downstream 3355   true scaffold_6: 2909130-2912484 Arabidopsis lyrata
AL6G17740 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 2911485-2912484 Arabidopsis lyrata
AL6G17740 2.0kb upstream 2.0kb upstream 4355   true scaffold_6: 2907130-2911484 Arabidopsis lyrata
AL6G17740 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 2907130-2909129 Arabidopsis lyrata
AL6G17740 2.0kb downstream 2.0kb downstream 4355   true scaffold_6: 2909130-2913484 Arabidopsis lyrata
AL6G17740 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 2911485-2913484 Arabidopsis lyrata
AL6G17740 5.0kb upstream 5.0kb upstream 7355   true scaffold_6: 2904130-2911484 Arabidopsis lyrata
AL6G17740 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 2904130-2909129 Arabidopsis lyrata
AL6G17740 5.0kb downstream 5.0kb downstream 7355   true scaffold_6: 2909130-2916484 Arabidopsis lyrata
AL6G17740 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 2911485-2916484 Arabidopsis lyrata
AL6G17740 10.0kb upstream 10.0kb upstream 12355   true scaffold_6: 2899130-2911484 Arabidopsis lyrata
AL6G17740 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 2899130-2909129 Arabidopsis lyrata
AL6G17740 10.0kb downstream 10.0kb downstream 12355   true scaffold_6: 2909130-2921484 Arabidopsis lyrata
AL6G17740 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 2911485-2921484 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381048 5261 Brassicaceae View MSA
123840099 5264 Brassicales-Malvales View MSA
124351160 5266 SBM View MSA
124247496 5268 Malvidae View MSA
124068795 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain