Gene : AL6G31040 A. lyrata v2.1

Defline:  (1 of 1) 2.5.1.79 - Thermospermine synthase Genomic Order:  1991
Name:  ? AL6G31040 Secondary Identifier:  ? PAC:35927281

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ARGSPECAT-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G31040 0.5kb upstream 0.5kb upstream 2784   true scaffold_6: 8253131-8255914 Arabidopsis lyrata
AL6G31040 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8255415-8255914 Arabidopsis lyrata
AL6G31040 0.5kb downstream 0.5kb downstream 2784   true scaffold_6: 8252631-8255414 Arabidopsis lyrata
AL6G31040 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8252631-8253130 Arabidopsis lyrata
AL6G31040 1.0kb upstream 1.0kb upstream 3284   true scaffold_6: 8253131-8256414 Arabidopsis lyrata
AL6G31040 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8255415-8256414 Arabidopsis lyrata
AL6G31040 1.0kb downstream 1.0kb downstream 3284   true scaffold_6: 8252131-8255414 Arabidopsis lyrata
AL6G31040 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8252131-8253130 Arabidopsis lyrata
AL6G31040 2.0kb upstream 2.0kb upstream 4284   true scaffold_6: 8253131-8257414 Arabidopsis lyrata
AL6G31040 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8255415-8257414 Arabidopsis lyrata
AL6G31040 2.0kb downstream 2.0kb downstream 4284   true scaffold_6: 8251131-8255414 Arabidopsis lyrata
AL6G31040 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8251131-8253130 Arabidopsis lyrata
AL6G31040 5.0kb upstream 5.0kb upstream 7284   true scaffold_6: 8253131-8260414 Arabidopsis lyrata
AL6G31040 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8255415-8260414 Arabidopsis lyrata
AL6G31040 5.0kb downstream 5.0kb downstream 7284   true scaffold_6: 8248131-8255414 Arabidopsis lyrata
AL6G31040 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8248131-8253130 Arabidopsis lyrata
AL6G31040 10.0kb upstream 10.0kb upstream 12284   true scaffold_6: 8253131-8265414 Arabidopsis lyrata
AL6G31040 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8255415-8265414 Arabidopsis lyrata
AL6G31040 10.0kb downstream 10.0kb downstream 12284   true scaffold_6: 8243131-8255414 Arabidopsis lyrata
AL6G31040 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8243131-8253130 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367295 5261 Brassicaceae View MSA
123830996 5264 Brassicales-Malvales View MSA
124336686 5266 SBM View MSA
124242056 5268 Malvidae View MSA
124068940 5270 Rosid View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain