Gene : AL6G28870 A. lyrata v2.1

Defline:  (1 of 6) 2.3.1.12 - Dihydrolipoyllysine-residue acetyltransferase / Transacetylase X Genomic Order:  1786
Name:  ? AL6G28870 Secondary Identifier:  ? PAC:35926592

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5173 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PYRUVDEHYD-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G28870 0.5kb upstream 0.5kb upstream 2095   true scaffold_6: 7350520-7352614 Arabidopsis lyrata
AL6G28870 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7352115-7352614 Arabidopsis lyrata
AL6G28870 0.5kb downstream 0.5kb downstream 2095   true scaffold_6: 7350020-7352114 Arabidopsis lyrata
AL6G28870 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7350020-7350519 Arabidopsis lyrata
AL6G28870 1.0kb upstream 1.0kb upstream 2595   true scaffold_6: 7350520-7353114 Arabidopsis lyrata
AL6G28870 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7352115-7353114 Arabidopsis lyrata
AL6G28870 1.0kb downstream 1.0kb downstream 2595   true scaffold_6: 7349520-7352114 Arabidopsis lyrata
AL6G28870 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7349520-7350519 Arabidopsis lyrata
AL6G28870 2.0kb upstream 2.0kb upstream 3595   true scaffold_6: 7350520-7354114 Arabidopsis lyrata
AL6G28870 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7352115-7354114 Arabidopsis lyrata
AL6G28870 2.0kb downstream 2.0kb downstream 3595   true scaffold_6: 7348520-7352114 Arabidopsis lyrata
AL6G28870 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7348520-7350519 Arabidopsis lyrata
AL6G28870 5.0kb upstream 5.0kb upstream 6595   true scaffold_6: 7350520-7357114 Arabidopsis lyrata
AL6G28870 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7352115-7357114 Arabidopsis lyrata
AL6G28870 5.0kb downstream 5.0kb downstream 6595   true scaffold_6: 7345520-7352114 Arabidopsis lyrata
AL6G28870 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7345520-7350519 Arabidopsis lyrata
AL6G28870 10.0kb upstream 10.0kb upstream 11595   true scaffold_6: 7350520-7362114 Arabidopsis lyrata
AL6G28870 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7352115-7362114 Arabidopsis lyrata
AL6G28870 10.0kb downstream 10.0kb downstream 11595   true scaffold_6: 7340520-7352114 Arabidopsis lyrata
AL6G28870 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7340520-7350519 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371700 5261 Brassicaceae View MSA
123838380 5264 Brassicales-Malvales View MSA
124343466 5266 SBM View MSA
124244385 5268 Malvidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain