Gene : AL6G26110 A. lyrata v2.1

Defline:  (1 of 1) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  1520
Name:  ? AL6G26110 Secondary Identifier:  ? PAC:35929230

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G26110 0.5kb upstream 0.5kb upstream 3119   true scaffold_6: 6218377-6221495 Arabidopsis lyrata
AL6G26110 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6220996-6221495 Arabidopsis lyrata
AL6G26110 0.5kb downstream 0.5kb downstream 3119   true scaffold_6: 6217877-6220995 Arabidopsis lyrata
AL6G26110 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6217877-6218376 Arabidopsis lyrata
AL6G26110 1.0kb upstream 1.0kb upstream 3619   true scaffold_6: 6218377-6221995 Arabidopsis lyrata
AL6G26110 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6220996-6221995 Arabidopsis lyrata
AL6G26110 1.0kb downstream 1.0kb downstream 3619   true scaffold_6: 6217377-6220995 Arabidopsis lyrata
AL6G26110 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6217377-6218376 Arabidopsis lyrata
AL6G26110 2.0kb upstream 2.0kb upstream 4619   true scaffold_6: 6218377-6222995 Arabidopsis lyrata
AL6G26110 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6220996-6222995 Arabidopsis lyrata
AL6G26110 2.0kb downstream 2.0kb downstream 4619   true scaffold_6: 6216377-6220995 Arabidopsis lyrata
AL6G26110 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6216377-6218376 Arabidopsis lyrata
AL6G26110 5.0kb upstream 5.0kb upstream 7619   true scaffold_6: 6218377-6225995 Arabidopsis lyrata
AL6G26110 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6220996-6225995 Arabidopsis lyrata
AL6G26110 5.0kb downstream 5.0kb downstream 7619   true scaffold_6: 6213377-6220995 Arabidopsis lyrata
AL6G26110 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6213377-6218376 Arabidopsis lyrata
AL6G26110 10.0kb upstream 10.0kb upstream 12619   true scaffold_6: 6218377-6230995 Arabidopsis lyrata
AL6G26110 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6220996-6230995 Arabidopsis lyrata
AL6G26110 10.0kb downstream 10.0kb downstream 12619   true scaffold_6: 6208377-6220995 Arabidopsis lyrata
AL6G26110 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6208377-6218376 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373182 5261 Brassicaceae View MSA
123835527 5264 Brassicales-Malvales View MSA
124340631 5266 SBM View MSA
124244574 5268 Malvidae View MSA
124066347 5270 Rosid View MSA
123741338 5271 Pentapetalae View MSA
122790774 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain