Gene : AL6G25470 A. lyrata v2.1

Defline:  (1 of 1) PTHR10366:SF388 - CINNAMOYL COA REDUCTASE-LIKE PROTEIN Genomic Order:  1459
Name:  ? AL6G25470 Secondary Identifier:  ? PAC:35926985

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-361 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G25470 0.5kb upstream 0.5kb upstream 3732   true scaffold_6: 5937029-5940760 Arabidopsis lyrata
AL6G25470 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 5940261-5940760 Arabidopsis lyrata
AL6G25470 0.5kb downstream 0.5kb downstream 3732   true scaffold_6: 5936529-5940260 Arabidopsis lyrata
AL6G25470 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 5936529-5937028 Arabidopsis lyrata
AL6G25470 1.0kb upstream 1.0kb upstream 4232   true scaffold_6: 5937029-5941260 Arabidopsis lyrata
AL6G25470 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 5940261-5941260 Arabidopsis lyrata
AL6G25470 1.0kb downstream 1.0kb downstream 4232   true scaffold_6: 5936029-5940260 Arabidopsis lyrata
AL6G25470 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 5936029-5937028 Arabidopsis lyrata
AL6G25470 2.0kb upstream 2.0kb upstream 5232   true scaffold_6: 5937029-5942260 Arabidopsis lyrata
AL6G25470 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 5940261-5942260 Arabidopsis lyrata
AL6G25470 2.0kb downstream 2.0kb downstream 5232   true scaffold_6: 5935029-5940260 Arabidopsis lyrata
AL6G25470 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 5935029-5937028 Arabidopsis lyrata
AL6G25470 5.0kb upstream 5.0kb upstream 8232   true scaffold_6: 5937029-5945260 Arabidopsis lyrata
AL6G25470 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 5940261-5945260 Arabidopsis lyrata
AL6G25470 5.0kb downstream 5.0kb downstream 8232   true scaffold_6: 5932029-5940260 Arabidopsis lyrata
AL6G25470 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 5932029-5937028 Arabidopsis lyrata
AL6G25470 10.0kb upstream 10.0kb upstream 13232   true scaffold_6: 5937029-5950260 Arabidopsis lyrata
AL6G25470 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 5940261-5950260 Arabidopsis lyrata
AL6G25470 10.0kb downstream 10.0kb downstream 13232   true scaffold_6: 5927029-5940260 Arabidopsis lyrata
AL6G25470 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 5927029-5937028 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380457 5261 Brassicaceae View MSA
123838997 5264 Brassicales-Malvales View MSA
124345323 5266 SBM View MSA
124236858 5268 Malvidae View MSA
124060434 5270 Rosid View MSA
123740788 5271 Pentapetalae View MSA
122786439 5272 Eudicot View MSA
122047901 5273 Angiosperm View MSA
121310812 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain