Gene : AL6G22640 A. lyrata v2.1

Defline:  (1 of 2) K01586 - diaminopimelate decarboxylase (lysA) Genomic Order:  1191
Name:  ? AL6G22640 Secondary Identifier:  ? PAC:35929440

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5097 Arabidopsis lyrata pathologic  
Alyrata PWY-724 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G22640 0.5kb upstream 0.5kb upstream 3607   true scaffold_6: 4805435-4809041 Arabidopsis lyrata
AL6G22640 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 4808542-4809041 Arabidopsis lyrata
AL6G22640 0.5kb downstream 0.5kb downstream 3607   true scaffold_6: 4804935-4808541 Arabidopsis lyrata
AL6G22640 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 4804935-4805434 Arabidopsis lyrata
AL6G22640 1.0kb upstream 1.0kb upstream 4107   true scaffold_6: 4805435-4809541 Arabidopsis lyrata
AL6G22640 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 4808542-4809541 Arabidopsis lyrata
AL6G22640 1.0kb downstream 1.0kb downstream 4107   true scaffold_6: 4804435-4808541 Arabidopsis lyrata
AL6G22640 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 4804435-4805434 Arabidopsis lyrata
AL6G22640 2.0kb upstream 2.0kb upstream 5107   true scaffold_6: 4805435-4810541 Arabidopsis lyrata
AL6G22640 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 4808542-4810541 Arabidopsis lyrata
AL6G22640 2.0kb downstream 2.0kb downstream 5107   true scaffold_6: 4803435-4808541 Arabidopsis lyrata
AL6G22640 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 4803435-4805434 Arabidopsis lyrata
AL6G22640 5.0kb upstream 5.0kb upstream 8107   true scaffold_6: 4805435-4813541 Arabidopsis lyrata
AL6G22640 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 4808542-4813541 Arabidopsis lyrata
AL6G22640 5.0kb downstream 5.0kb downstream 8107   true scaffold_6: 4800435-4808541 Arabidopsis lyrata
AL6G22640 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 4800435-4805434 Arabidopsis lyrata
AL6G22640 10.0kb upstream 10.0kb upstream 13107   true scaffold_6: 4805435-4818541 Arabidopsis lyrata
AL6G22640 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 4808542-4818541 Arabidopsis lyrata
AL6G22640 10.0kb downstream 10.0kb downstream 13107   true scaffold_6: 4795435-4808541 Arabidopsis lyrata
AL6G22640 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 4795435-4805434 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377657 5261 Brassicaceae View MSA
123841462 5264 Brassicales-Malvales View MSA
124337243 5266 SBM View MSA
124250091 5268 Malvidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain