Gene : AL6G24320 A. lyrata v2.1

Defline:  (1 of 1) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Genomic Order:  1354
Name:  ? AL6G24320 Secondary Identifier:  ? PAC:35927674

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-2541 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G24320 0.5kb upstream 0.5kb upstream 3749   true scaffold_6: 5534629-5538377 Arabidopsis lyrata
AL6G24320 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 5537878-5538377 Arabidopsis lyrata
AL6G24320 0.5kb downstream 0.5kb downstream 3749   true scaffold_6: 5534129-5537877 Arabidopsis lyrata
AL6G24320 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 5534129-5534628 Arabidopsis lyrata
AL6G24320 1.0kb upstream 1.0kb upstream 4249   true scaffold_6: 5534629-5538877 Arabidopsis lyrata
AL6G24320 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 5537878-5538877 Arabidopsis lyrata
AL6G24320 1.0kb downstream 1.0kb downstream 4249   true scaffold_6: 5533629-5537877 Arabidopsis lyrata
AL6G24320 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 5533629-5534628 Arabidopsis lyrata
AL6G24320 2.0kb upstream 2.0kb upstream 5249   true scaffold_6: 5534629-5539877 Arabidopsis lyrata
AL6G24320 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 5537878-5539877 Arabidopsis lyrata
AL6G24320 2.0kb downstream 2.0kb downstream 5249   true scaffold_6: 5532629-5537877 Arabidopsis lyrata
AL6G24320 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 5532629-5534628 Arabidopsis lyrata
AL6G24320 5.0kb upstream 5.0kb upstream 8249   true scaffold_6: 5534629-5542877 Arabidopsis lyrata
AL6G24320 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 5537878-5542877 Arabidopsis lyrata
AL6G24320 5.0kb downstream 5.0kb downstream 8249   true scaffold_6: 5529629-5537877 Arabidopsis lyrata
AL6G24320 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 5529629-5534628 Arabidopsis lyrata
AL6G24320 10.0kb upstream 10.0kb upstream 13249   true scaffold_6: 5534629-5547877 Arabidopsis lyrata
AL6G24320 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 5537878-5547877 Arabidopsis lyrata
AL6G24320 10.0kb downstream 10.0kb downstream 13249   true scaffold_6: 5524629-5537877 Arabidopsis lyrata
AL6G24320 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 5524629-5534628 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
122372640 5261 Brassicaceae View MSA
123827735 5264 Brassicales-Malvales View MSA
124350111 5266 SBM View MSA
124248608 5268 Malvidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain