Gene : AL6G39640 A. lyrata v2.1

Defline:  (1 of 1) 6.3.2.3 - Glutathione synthase / GSH synthetase Genomic Order:  2788
Name:  ? AL6G39640 Secondary Identifier:  ? PAC:35926280

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUTATHIONESYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G39640 0.5kb upstream 0.5kb upstream 3637   true scaffold_6: 12852550-12856186 Arabidopsis lyrata
AL6G39640 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 12852550-12853049 Arabidopsis lyrata
AL6G39640 0.5kb downstream 0.5kb downstream 3637   true scaffold_6: 12853050-12856686 Arabidopsis lyrata
AL6G39640 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 12856187-12856686 Arabidopsis lyrata
AL6G39640 1.0kb upstream 1.0kb upstream 4137   true scaffold_6: 12852050-12856186 Arabidopsis lyrata
AL6G39640 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 12852050-12853049 Arabidopsis lyrata
AL6G39640 1.0kb downstream 1.0kb downstream 4137   true scaffold_6: 12853050-12857186 Arabidopsis lyrata
AL6G39640 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 12856187-12857186 Arabidopsis lyrata
AL6G39640 2.0kb upstream 2.0kb upstream 5137   true scaffold_6: 12851050-12856186 Arabidopsis lyrata
AL6G39640 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 12851050-12853049 Arabidopsis lyrata
AL6G39640 2.0kb downstream 2.0kb downstream 5137   true scaffold_6: 12853050-12858186 Arabidopsis lyrata
AL6G39640 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 12856187-12858186 Arabidopsis lyrata
AL6G39640 5.0kb upstream 5.0kb upstream 8137   true scaffold_6: 12848050-12856186 Arabidopsis lyrata
AL6G39640 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 12848050-12853049 Arabidopsis lyrata
AL6G39640 5.0kb downstream 5.0kb downstream 8137   true scaffold_6: 12853050-12861186 Arabidopsis lyrata
AL6G39640 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 12856187-12861186 Arabidopsis lyrata
AL6G39640 10.0kb upstream 10.0kb upstream 13137   true scaffold_6: 12843050-12856186 Arabidopsis lyrata
AL6G39640 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 12843050-12853049 Arabidopsis lyrata
AL6G39640 10.0kb downstream 10.0kb downstream 13137   true scaffold_6: 12853050-12866186 Arabidopsis lyrata
AL6G39640 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 12856187-12866186 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026355 5273 Angiosperm View MSA
122367190 5261 Brassicaceae View MSA
123830197 5264 Brassicales-Malvales View MSA
124336485 5266 SBM View MSA
124250828 5268 Malvidae View MSA
124064808 5270 Rosid View MSA
123747929 5271 Pentapetalae View MSA
122794836 5272 Eudicot View MSA
121345791 5274 Embryophyte View MSA
123424921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain