Gene : AL6G38350 A. lyrata v2.1

Defline:  (1 of 1) 2.7.4.25 - (d)CMP kinase / Deoxycytidylate kinase Genomic Order:  2671
Name:  ? AL6G38350 Secondary Identifier:  ? PAC:35929036

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-162 Arabidopsis lyrata pathologic  
Alyrata PWY-7176 Arabidopsis lyrata pathologic  
Alyrata PWY-7196 Arabidopsis lyrata pathologic  
Alyrata PWY-7197 Arabidopsis lyrata pathologic  
Alyrata PWY-7200 Arabidopsis lyrata pathologic  
Alyrata PWY-7205 Arabidopsis lyrata pathologic  
Alyrata PWY-7208 Arabidopsis lyrata pathologic  
Alyrata PWY-7211 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G38350 0.5kb upstream 0.5kb upstream 3296   true scaffold_6: 12041045-12044340 Arabidopsis lyrata
AL6G38350 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 12041045-12041544 Arabidopsis lyrata
AL6G38350 0.5kb downstream 0.5kb downstream 3296   true scaffold_6: 12041545-12044840 Arabidopsis lyrata
AL6G38350 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 12044341-12044840 Arabidopsis lyrata
AL6G38350 1.0kb upstream 1.0kb upstream 3796   true scaffold_6: 12040545-12044340 Arabidopsis lyrata
AL6G38350 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 12040545-12041544 Arabidopsis lyrata
AL6G38350 1.0kb downstream 1.0kb downstream 3796   true scaffold_6: 12041545-12045340 Arabidopsis lyrata
AL6G38350 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 12044341-12045340 Arabidopsis lyrata
AL6G38350 2.0kb upstream 2.0kb upstream 4796   true scaffold_6: 12039545-12044340 Arabidopsis lyrata
AL6G38350 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 12039545-12041544 Arabidopsis lyrata
AL6G38350 2.0kb downstream 2.0kb downstream 4796   true scaffold_6: 12041545-12046340 Arabidopsis lyrata
AL6G38350 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 12044341-12046340 Arabidopsis lyrata
AL6G38350 5.0kb upstream 5.0kb upstream 7796   true scaffold_6: 12036545-12044340 Arabidopsis lyrata
AL6G38350 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 12036545-12041544 Arabidopsis lyrata
AL6G38350 5.0kb downstream 5.0kb downstream 7796   true scaffold_6: 12041545-12049340 Arabidopsis lyrata
AL6G38350 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 12044341-12049340 Arabidopsis lyrata
AL6G38350 10.0kb upstream 10.0kb upstream 12796   true scaffold_6: 12031545-12044340 Arabidopsis lyrata
AL6G38350 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 12031545-12041544 Arabidopsis lyrata
AL6G38350 10.0kb downstream 10.0kb downstream 12796   true scaffold_6: 12041545-12054340 Arabidopsis lyrata
AL6G38350 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 12044341-12054340 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360288 5261 Brassicaceae View MSA
123829463 5264 Brassicales-Malvales View MSA
124343713 5266 SBM View MSA
124237941 5268 Malvidae View MSA
124067216 5270 Rosid View MSA
123753450 5271 Pentapetalae View MSA
122794226 5272 Eudicot View MSA
122041602 5273 Angiosperm View MSA
121350665 5274 Embryophyte View MSA
123427117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain