Gene : AL6G32170 A. lyrata v2.1

Defline:  (1 of 2) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 Genomic Order:  2104
Name:  ? AL6G32170 Secondary Identifier:  ? PAC:35927042

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G32170 0.5kb upstream 0.5kb upstream 1435   true scaffold_6: 8750442-8751876 Arabidopsis lyrata
AL6G32170 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8751377-8751876 Arabidopsis lyrata
AL6G32170 0.5kb downstream 0.5kb downstream 1435   true scaffold_6: 8749942-8751376 Arabidopsis lyrata
AL6G32170 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8749942-8750441 Arabidopsis lyrata
AL6G32170 1.0kb upstream 1.0kb upstream 1935   true scaffold_6: 8750442-8752376 Arabidopsis lyrata
AL6G32170 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8751377-8752376 Arabidopsis lyrata
AL6G32170 1.0kb downstream 1.0kb downstream 1935   true scaffold_6: 8749442-8751376 Arabidopsis lyrata
AL6G32170 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8749442-8750441 Arabidopsis lyrata
AL6G32170 2.0kb upstream 2.0kb upstream 2935   true scaffold_6: 8750442-8753376 Arabidopsis lyrata
AL6G32170 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8751377-8753376 Arabidopsis lyrata
AL6G32170 2.0kb downstream 2.0kb downstream 2935   true scaffold_6: 8748442-8751376 Arabidopsis lyrata
AL6G32170 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8748442-8750441 Arabidopsis lyrata
AL6G32170 5.0kb upstream 5.0kb upstream 5935   true scaffold_6: 8750442-8756376 Arabidopsis lyrata
AL6G32170 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8751377-8756376 Arabidopsis lyrata
AL6G32170 5.0kb downstream 5.0kb downstream 5935   true scaffold_6: 8745442-8751376 Arabidopsis lyrata
AL6G32170 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8745442-8750441 Arabidopsis lyrata
AL6G32170 10.0kb upstream 10.0kb upstream 10935   true scaffold_6: 8750442-8761376 Arabidopsis lyrata
AL6G32170 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8751377-8761376 Arabidopsis lyrata
AL6G32170 10.0kb downstream 10.0kb downstream 10935   true scaffold_6: 8740442-8751376 Arabidopsis lyrata
AL6G32170 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8740442-8750441 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379167 5261 Brassicaceae View MSA
123833527 5264 Brassicales-Malvales View MSA
124348843 5266 SBM View MSA
124248046 5268 Malvidae View MSA
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain