Gene : AL6G32030 A. lyrata v2.1

Defline:  (1 of 1) PTHR10168:SF112 - GLUTAREDOXIN-C4 Genomic Order:  2089
Name:  ? AL6G32030 Secondary Identifier:  ? PAC:35926878

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata THIOREDOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G32030 0.5kb upstream 0.5kb upstream 1815   true scaffold_6: 8690861-8692675 Arabidopsis lyrata
AL6G32030 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8690861-8691360 Arabidopsis lyrata
AL6G32030 0.5kb downstream 0.5kb downstream 1815   true scaffold_6: 8691361-8693175 Arabidopsis lyrata
AL6G32030 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8692676-8693175 Arabidopsis lyrata
AL6G32030 1.0kb upstream 1.0kb upstream 2315   true scaffold_6: 8690361-8692675 Arabidopsis lyrata
AL6G32030 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8690361-8691360 Arabidopsis lyrata
AL6G32030 1.0kb downstream 1.0kb downstream 2315   true scaffold_6: 8691361-8693675 Arabidopsis lyrata
AL6G32030 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8692676-8693675 Arabidopsis lyrata
AL6G32030 2.0kb upstream 2.0kb upstream 3315   true scaffold_6: 8689361-8692675 Arabidopsis lyrata
AL6G32030 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8689361-8691360 Arabidopsis lyrata
AL6G32030 2.0kb downstream 2.0kb downstream 3315   true scaffold_6: 8691361-8694675 Arabidopsis lyrata
AL6G32030 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8692676-8694675 Arabidopsis lyrata
AL6G32030 5.0kb upstream 5.0kb upstream 6315   true scaffold_6: 8686361-8692675 Arabidopsis lyrata
AL6G32030 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8686361-8691360 Arabidopsis lyrata
AL6G32030 5.0kb downstream 5.0kb downstream 6315   true scaffold_6: 8691361-8697675 Arabidopsis lyrata
AL6G32030 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8692676-8697675 Arabidopsis lyrata
AL6G32030 10.0kb upstream 10.0kb upstream 11315   true scaffold_6: 8681361-8692675 Arabidopsis lyrata
AL6G32030 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8681361-8691360 Arabidopsis lyrata
AL6G32030 10.0kb downstream 10.0kb downstream 11315   true scaffold_6: 8691361-8702675 Arabidopsis lyrata
AL6G32030 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8692676-8702675 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364139 5261 Brassicaceae View MSA
123830349 5264 Brassicales-Malvales View MSA
124321666 5266 SBM View MSA
124251617 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain