Gene : AL6G32420 A. lyrata v2.1
Defline:  (1 of 8) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  2127
Name:  ? AL6G32420 Secondary Identifier:  ? PAC:35926970
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G32420 0.5kb upstream 0.5kb upstream 1790   true scaffold_6: 8858524-8860313 Arabidopsis lyrata
AL6G32420 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8859814-8860313 Arabidopsis lyrata
AL6G32420 0.5kb downstream 0.5kb downstream 1790   true scaffold_6: 8858024-8859813 Arabidopsis lyrata
AL6G32420 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8858024-8858523 Arabidopsis lyrata
AL6G32420 1.0kb upstream 1.0kb upstream 2290   true scaffold_6: 8858524-8860813 Arabidopsis lyrata
AL6G32420 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8859814-8860813 Arabidopsis lyrata
AL6G32420 1.0kb downstream 1.0kb downstream 2290   true scaffold_6: 8857524-8859813 Arabidopsis lyrata
AL6G32420 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8857524-8858523 Arabidopsis lyrata
AL6G32420 2.0kb upstream 2.0kb upstream 3290   true scaffold_6: 8858524-8861813 Arabidopsis lyrata
AL6G32420 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8859814-8861813 Arabidopsis lyrata
AL6G32420 2.0kb downstream 2.0kb downstream 3290   true scaffold_6: 8856524-8859813 Arabidopsis lyrata
AL6G32420 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8856524-8858523 Arabidopsis lyrata
AL6G32420 5.0kb upstream 5.0kb upstream 6290   true scaffold_6: 8858524-8864813 Arabidopsis lyrata
AL6G32420 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8859814-8864813 Arabidopsis lyrata
AL6G32420 5.0kb downstream 5.0kb downstream 6290   true scaffold_6: 8853524-8859813 Arabidopsis lyrata
AL6G32420 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8853524-8858523 Arabidopsis lyrata
AL6G32420 10.0kb upstream 10.0kb upstream 11290   true scaffold_6: 8858524-8869813 Arabidopsis lyrata
AL6G32420 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8859814-8869813 Arabidopsis lyrata
AL6G32420 10.0kb downstream 10.0kb downstream 11290   true scaffold_6: 8848524-8859813 Arabidopsis lyrata
AL6G32420 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8848524-8858523 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122323570 5261 Brassicaceae Singleton cluster - no MSA
123765123 5264 Brassicales-Malvales Singleton cluster - no MSA
124263751 5266 SBM Singleton cluster - no MSA
124249108 5268 Malvidae View MSA
124039466 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain