1000 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| 29757.t000039 | conserved hypothetical protein | R. communis v0.1 |
447
 |
29757: 302379-302825 | |
| 29763.t000011 | conserved hypothetical protein | R. communis v0.1 |
393
|
29763: 127324-127716 | |
| 30024.t000014 | (1 of 26) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | R. communis v0.1 |
739
|
30024: 248172-248910 | |
| 30071.t000012 | conserved hypothetical protein | R. communis v0.1 |
837
|
30071: 77762-78598 | |
| 30076.t000271 | (1 of 26) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | R. communis v0.1 |
516
|
30076: 1694921-1695436 | |
| 47194.t000002 | (1 of 2) PTHR22847:SF433 - RETINOBLASTOMA-BINDING PROTEIN 5 | R. communis v0.1 |
1140
|
47194: 8788-9927 | |
| 29625.t000010 | conserved hypothetical protein | R. communis v0.1 |
516
|
29625: 69435-69950 | |
| 28748.t000011 | (1 of 1) PF03732//PF13650 - Retrotransposon gag protein (Retrotrans_gag) // Aspartyl protease (Asp_protease_2) | R. communis v0.1 |
1587
|
28748: 98751-100337 | |
| 27843.t000007 | (1 of 26) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | R. communis v0.1 |
834
|
27843: 53971-54804 | |
| 27843.t000009 | (1 of 26) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | R. communis v0.1 |
867
|
27843: 64627-65493 | |
| Cucsa.317590 | (1 of 34) PF08284 - Retroviral aspartyl protease (RVP_2) | C. sativus v1.0 |
1529
|
scaffold03054: 1966-3494 | |
| Cucsa.316790 | (1 of 2) PF00078//PF00665 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) | C. sativus v1.0 |
3986
|
scaffold03050: 8120-12105 | |
| Cucsa.316910 | (1 of 89) PTHR10178:SF14 - RETROVIRUS POLYPROTEIN | C. sativus v1.0 |
1106
|
scaffold03050: 140719-141824 | |
| Cucsa.369490 | (1 of 3) PF03732//PF08284 - Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | C. sativus v1.0 |
1631
|
scaffold03646: 93553-95183 | |
| Cucsa.369450 | (1 of 3) PF00078//PF03732//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | C. sativus v1.0 |
1867
|
scaffold03646: 15358-17224 | |
| Cucsa.369460 | (1 of 9) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN | C. sativus v1.0 |
2251
|
scaffold03646: 26966-29216 | |
| Cucsa.354960 | (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | C. sativus v1.0 |
586
|
scaffold03558: 100-685 | |
| Cucsa.383100 | (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | C. sativus v1.0 |
3193
|
scaffold03882: 29786-32978 | |
| Cucsa.390840 | (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | C. sativus v1.0 |
2470
|
scaffold04031: 38905-41374 | |
| Cucsa.023240 | (1 of 1) PF00078//PF00385//PF03732//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | C. sativus v1.0 |
4683
|
scaffold00322: 21557-26239 | |
| Cucsa.079430 | (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | C. sativus v1.0 |
644
|
scaffold00793: 2274085-2274728 | |
| Cucsa.079650 | (1 of 6) PF13650 - Aspartyl protease (Asp_protease_2) | C. sativus v1.0 |
2214
|
scaffold00793: 2534047-2536260 | |
| Cucsa.054680 | (1 of 4) PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) | C. sativus v1.0 |
4357
|
scaffold00585: 230228-234584 | |
| Cucsa.108550 | (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | C. sativus v1.0 |
2750
|
scaffold00931: 681271-684020 | |
| Cucsa.355910 | (1 of 34) PF08284 - Retroviral aspartyl protease (RVP_2) | C. sativus v1.0 |
1492
|
scaffold03577: 535432-536923 | |
| Cucsa.027470 | (1 of 1) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) | C. sativus v1.0 |
4266
|
scaffold00378: 234423-238688 | |
| Cucsa.031240.1 | (1 of 2) PF00078//PF00665//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Retroviral aspartyl protease (RVP_2) | C. sativus v1.0 |
5197
|
scaffold00429: 133878-139074 | |
| Cucsa.058600 | (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | C. sativus v1.0 |
3710
|
scaffold00614: 727675-731384 | |
| Cucsa.068380 | (1 of 86) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | C. sativus v1.0 |
1362
|
scaffold00707: 178736-180097 | |
| Cucsa.156090 | (1 of 9) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN | C. sativus v1.0 |
2184
|
scaffold01139: 348586-350769 |
1000 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| 47194.m000038 | R. communis v0.1 | 123429154 | expressed protein | 10 | 5275 | Viridiplantae |
| Cucsa.058600.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.108550.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.212270.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.213260.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.235650.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.235840.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.249330.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.316910.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.317590.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.369490.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.383100.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Cucsa.390840.1 | C. sativus v1.0 | 123429154 | expressed protein | 32 | 5275 | Viridiplantae |
| Thhalv10017833m | E. salsugineum v1.0 | 123429154 | expressed protein | 20 | 5275 | Viridiplantae |
| Thhalv10024067m | E. salsugineum v1.0 | 123429154 | expressed protein | 20 | 5275 | Viridiplantae |
| Thhalv10023044m | E. salsugineum v1.0 | 123429154 | expressed protein | 20 | 5275 | Viridiplantae |
| Thhalv10015409m | E. salsugineum v1.0 | 123429154 | expressed protein | 20 | 5275 | Viridiplantae |
| Thecc1EG022739t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG022803t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG022738t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG023155t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG022913t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG023754t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG022818t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG023017t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG022740t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG039916t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG038803t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG038839t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
| Thecc1EG039262t1 | T. cacao v1.1 | 123429154 | expressed protein | 232 | 5275 | Viridiplantae |
