Gene : Cucsa.317590 C. sativus v1.0
Defline:  (1 of 34) PF08284 - Retroviral aspartyl protease (RVP_2) Genomic Order:  1
Name:  ? Cucsa.317590 Secondary Identifier:  ? PAC:16977150
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.317590 0.5kb upstream 0.5kb upstream 2029 true scaffold03054: 1466-3494 Cucumis sativus
Cucsa.317590 0.5kb upstream 0.5kb upstream 500 false scaffold03054: 1466-1965 Cucumis sativus
Cucsa.317590 0.5kb downstream 0.5kb downstream 2029 true scaffold03054: 1966-3994 Cucumis sativus
Cucsa.317590 0.5kb downstream 0.5kb downstream 500 false scaffold03054: 3495-3994 Cucumis sativus
Cucsa.317590 1.0kb upstream 1.0kb upstream 2529 true scaffold03054: 966-3494 Cucumis sativus
Cucsa.317590 1.0kb upstream 1.0kb upstream 1000 false scaffold03054: 966-1965 Cucumis sativus
Cucsa.317590 1.0kb downstream 1.0kb downstream 2529 true scaffold03054: 1966-4494 Cucumis sativus
Cucsa.317590 1.0kb downstream 1.0kb downstream 1000 false scaffold03054: 3495-4494 Cucumis sativus
Cucsa.317590 2.0kb upstream 2.0kb upstream 3494 true scaffold03054: 1-3494 Cucumis sativus
Cucsa.317590 2.0kb upstream 2.0kb upstream 1965 false scaffold03054: 1-1965 Cucumis sativus
Cucsa.317590 2.0kb downstream 2.0kb downstream 3529 true scaffold03054: 1966-5494 Cucumis sativus
Cucsa.317590 2.0kb downstream 2.0kb downstream 2000 false scaffold03054: 3495-5494 Cucumis sativus
Cucsa.317590 5.0kb upstream 5.0kb upstream 3494 true scaffold03054: 1-3494 Cucumis sativus
Cucsa.317590 5.0kb upstream 5.0kb upstream 1965 false scaffold03054: 1-1965 Cucumis sativus
Cucsa.317590 5.0kb downstream 5.0kb downstream 6529 true scaffold03054: 1966-8494 Cucumis sativus
Cucsa.317590 5.0kb downstream 5.0kb downstream 5000 false scaffold03054: 3495-8494 Cucumis sativus
Cucsa.317590 10.0kb upstream 10.0kb upstream 3494 true scaffold03054: 1-3494 Cucumis sativus
Cucsa.317590 10.0kb upstream 10.0kb upstream 1965 false scaffold03054: 1-1965 Cucumis sativus
Cucsa.317590 10.0kb downstream 10.0kb downstream 11529 true scaffold03054: 1966-13494 Cucumis sativus
Cucsa.317590 10.0kb downstream 10.0kb downstream 10000 false scaffold03054: 3495-13494 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237441 5265 Fabidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain