Gene : 28748.t000011 R. communis v0.1
Defline:  (1 of 1) PF03732//PF13650 - Retrotransposon gag protein (Retrotrans_gag) // Aspartyl protease (Asp_protease_2) Genomic Order:  11
Name:  ? 28748.t000011 Secondary Identifier:  ? PAC:16801641
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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28748.t000011 0.5kb upstream 0.5kb upstream 2087 true 28748: 98751-100837 Ricinus communis
28748.t000011 0.5kb upstream 0.5kb upstream 500 false 28748: 100338-100837 Ricinus communis
28748.t000011 0.5kb downstream 0.5kb downstream 2087 true 28748: 98251-100337 Ricinus communis
28748.t000011 0.5kb downstream 0.5kb downstream 500 false 28748: 98251-98750 Ricinus communis
28748.t000011 1.0kb upstream 1.0kb upstream 2587 true 28748: 98751-101337 Ricinus communis
28748.t000011 1.0kb upstream 1.0kb upstream 1000 false 28748: 100338-101337 Ricinus communis
28748.t000011 1.0kb downstream 1.0kb downstream 2587 true 28748: 97751-100337 Ricinus communis
28748.t000011 1.0kb downstream 1.0kb downstream 1000 false 28748: 97751-98750 Ricinus communis
28748.t000011 2.0kb upstream 2.0kb upstream 3587 true 28748: 98751-102337 Ricinus communis
28748.t000011 2.0kb upstream 2.0kb upstream 2000 false 28748: 100338-102337 Ricinus communis
28748.t000011 2.0kb downstream 2.0kb downstream 3587 true 28748: 96751-100337 Ricinus communis
28748.t000011 2.0kb downstream 2.0kb downstream 2000 false 28748: 96751-98750 Ricinus communis
28748.t000011 5.0kb upstream 5.0kb upstream 6587 true 28748: 98751-105337 Ricinus communis
28748.t000011 5.0kb upstream 5.0kb upstream 5000 false 28748: 100338-105337 Ricinus communis
28748.t000011 5.0kb downstream 5.0kb downstream 6587 true 28748: 93751-100337 Ricinus communis
28748.t000011 5.0kb downstream 5.0kb downstream 5000 false 28748: 93751-98750 Ricinus communis
28748.t000011 10.0kb upstream 10.0kb upstream 8522 true 28748: 98751-107272 Ricinus communis
28748.t000011 10.0kb upstream 10.0kb upstream 6935 false 28748: 100338-107272 Ricinus communis
28748.t000011 10.0kb downstream 10.0kb downstream 11587 true 28748: 88751-100337 Ricinus communis
28748.t000011 10.0kb downstream 10.0kb downstream 10000 false 28748: 88751-98750 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449302 5262 Malpighiales View MSA
124252727 5268 Malvidae View MSA
124073273 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain