Gene : 27843.t000009 R. communis v0.1
Defline:  (1 of 26) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  9
Name:  ? 27843.t000009 Secondary Identifier:  ? PAC:16799328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
27843.t000009 0.5kb upstream 0.5kb upstream 1367 true 27843: 64627-65993 Ricinus communis
27843.t000009 0.5kb upstream 0.5kb upstream 500 false 27843: 65494-65993 Ricinus communis
27843.t000009 0.5kb downstream 0.5kb downstream 1367 true 27843: 64127-65493 Ricinus communis
27843.t000009 0.5kb downstream 0.5kb downstream 500 false 27843: 64127-64626 Ricinus communis
27843.t000009 1.0kb upstream 1.0kb upstream 1867 true 27843: 64627-66493 Ricinus communis
27843.t000009 1.0kb upstream 1.0kb upstream 1000 false 27843: 65494-66493 Ricinus communis
27843.t000009 1.0kb downstream 1.0kb downstream 1867 true 27843: 63627-65493 Ricinus communis
27843.t000009 1.0kb downstream 1.0kb downstream 1000 false 27843: 63627-64626 Ricinus communis
27843.t000009 2.0kb upstream 2.0kb upstream 2867 true 27843: 64627-67493 Ricinus communis
27843.t000009 2.0kb upstream 2.0kb upstream 2000 false 27843: 65494-67493 Ricinus communis
27843.t000009 2.0kb downstream 2.0kb downstream 2867 true 27843: 62627-65493 Ricinus communis
27843.t000009 2.0kb downstream 2.0kb downstream 2000 false 27843: 62627-64626 Ricinus communis
27843.t000009 5.0kb upstream 5.0kb upstream 5867 true 27843: 64627-70493 Ricinus communis
27843.t000009 5.0kb upstream 5.0kb upstream 5000 false 27843: 65494-70493 Ricinus communis
27843.t000009 5.0kb downstream 5.0kb downstream 5867 true 27843: 59627-65493 Ricinus communis
27843.t000009 5.0kb downstream 5.0kb downstream 5000 false 27843: 59627-64626 Ricinus communis
27843.t000009 10.0kb upstream 10.0kb upstream 10867 true 27843: 64627-75493 Ricinus communis
27843.t000009 10.0kb upstream 10.0kb upstream 10000 false 27843: 65494-75493 Ricinus communis
27843.t000009 10.0kb downstream 10.0kb downstream 10867 true 27843: 54627-65493 Ricinus communis
27843.t000009 10.0kb downstream 10.0kb downstream 10000 false 27843: 54627-64626 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122447815 5262 Malpighiales View MSA
124249108 5268 Malvidae View MSA
124039466 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain