Gene : Cucsa.316910 C. sativus v1.0
Defline:  (1 of 89) PTHR10178:SF14 - RETROVIRUS POLYPROTEIN Genomic Order:  13
Name:  ? Cucsa.316910 Secondary Identifier:  ? PAC:16977133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.316910 0.5kb upstream 0.5kb upstream 1606 true scaffold03050: 140719-142324 Cucumis sativus
Cucsa.316910 0.5kb upstream 0.5kb upstream 500 false scaffold03050: 141825-142324 Cucumis sativus
Cucsa.316910 0.5kb downstream 0.5kb downstream 1606 true scaffold03050: 140219-141824 Cucumis sativus
Cucsa.316910 0.5kb downstream 0.5kb downstream 500 false scaffold03050: 140219-140718 Cucumis sativus
Cucsa.316910 1.0kb upstream 1.0kb upstream 2106 true scaffold03050: 140719-142824 Cucumis sativus
Cucsa.316910 1.0kb upstream 1.0kb upstream 1000 false scaffold03050: 141825-142824 Cucumis sativus
Cucsa.316910 1.0kb downstream 1.0kb downstream 2106 true scaffold03050: 139719-141824 Cucumis sativus
Cucsa.316910 1.0kb downstream 1.0kb downstream 1000 false scaffold03050: 139719-140718 Cucumis sativus
Cucsa.316910 2.0kb upstream 2.0kb upstream 3106 true scaffold03050: 140719-143824 Cucumis sativus
Cucsa.316910 2.0kb upstream 2.0kb upstream 2000 false scaffold03050: 141825-143824 Cucumis sativus
Cucsa.316910 2.0kb downstream 2.0kb downstream 3106 true scaffold03050: 138719-141824 Cucumis sativus
Cucsa.316910 2.0kb downstream 2.0kb downstream 2000 false scaffold03050: 138719-140718 Cucumis sativus
Cucsa.316910 5.0kb upstream 5.0kb upstream 6106 true scaffold03050: 140719-146824 Cucumis sativus
Cucsa.316910 5.0kb upstream 5.0kb upstream 5000 false scaffold03050: 141825-146824 Cucumis sativus
Cucsa.316910 5.0kb downstream 5.0kb downstream 6106 true scaffold03050: 135719-141824 Cucumis sativus
Cucsa.316910 5.0kb downstream 5.0kb downstream 5000 false scaffold03050: 135719-140718 Cucumis sativus
Cucsa.316910 10.0kb upstream 10.0kb upstream 6450 true scaffold03050: 140719-147168 Cucumis sativus
Cucsa.316910 10.0kb upstream 10.0kb upstream 5344 false scaffold03050: 141825-147168 Cucumis sativus
Cucsa.316910 10.0kb downstream 10.0kb downstream 11106 true scaffold03050: 130719-141824 Cucumis sativus
Cucsa.316910 10.0kb downstream 10.0kb downstream 10000 false scaffold03050: 130719-140718 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237441 5265 Fabidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain