Gene : AL6G52110 A. lyrata v2.1

Defline:  (1 of 2) PTHR12802:SF49 - PROTEIN REVEILLE 3-RELATED Genomic Order:  3891
Name:  ? AL6G52110 Secondary Identifier:  ? PAC:35926149

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G52110 0.5kb upstream 0.5kb upstream 2561   true scaffold_6: 24423597-24426157 Arabidopsis lyrata
AL6G52110 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 24425658-24426157 Arabidopsis lyrata
AL6G52110 0.5kb downstream 0.5kb downstream 2561   true scaffold_6: 24423097-24425657 Arabidopsis lyrata
AL6G52110 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 24423097-24423596 Arabidopsis lyrata
AL6G52110 1.0kb upstream 1.0kb upstream 3061   true scaffold_6: 24423597-24426657 Arabidopsis lyrata
AL6G52110 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 24425658-24426657 Arabidopsis lyrata
AL6G52110 1.0kb downstream 1.0kb downstream 3061   true scaffold_6: 24422597-24425657 Arabidopsis lyrata
AL6G52110 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 24422597-24423596 Arabidopsis lyrata
AL6G52110 2.0kb upstream 2.0kb upstream 4061   true scaffold_6: 24423597-24427657 Arabidopsis lyrata
AL6G52110 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 24425658-24427657 Arabidopsis lyrata
AL6G52110 2.0kb downstream 2.0kb downstream 4061   true scaffold_6: 24421597-24425657 Arabidopsis lyrata
AL6G52110 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 24421597-24423596 Arabidopsis lyrata
AL6G52110 5.0kb upstream 5.0kb upstream 7061   true scaffold_6: 24423597-24430657 Arabidopsis lyrata
AL6G52110 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 24425658-24430657 Arabidopsis lyrata
AL6G52110 5.0kb downstream 5.0kb downstream 7061   true scaffold_6: 24418597-24425657 Arabidopsis lyrata
AL6G52110 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 24418597-24423596 Arabidopsis lyrata
AL6G52110 10.0kb upstream 10.0kb upstream 12061   true scaffold_6: 24423597-24435657 Arabidopsis lyrata
AL6G52110 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 24425658-24435657 Arabidopsis lyrata
AL6G52110 10.0kb downstream 10.0kb downstream 12061   true scaffold_6: 24413597-24425657 Arabidopsis lyrata
AL6G52110 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 24413597-24423596 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363971 5261 Brassicaceae View MSA
123798658 5264 Brassicales-Malvales View MSA
124296266 5266 SBM View MSA
124148471 5268 Malvidae View MSA
124069739 5270 Rosid View MSA
123747099 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain