Gene : AL6G46190 A. lyrata v2.1

Defline:  (1 of 1) PTHR10024:SF225 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  3341
Name:  ? AL6G46190 Secondary Identifier:  ? PAC:35929632

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G46190 0.5kb upstream 0.5kb upstream 4793   true scaffold_6: 21317492-21322284 Arabidopsis lyrata
AL6G46190 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 21321785-21322284 Arabidopsis lyrata
AL6G46190 0.5kb downstream 0.5kb downstream 4793   true scaffold_6: 21316992-21321784 Arabidopsis lyrata
AL6G46190 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 21316992-21317491 Arabidopsis lyrata
AL6G46190 1.0kb upstream 1.0kb upstream 5293   true scaffold_6: 21317492-21322784 Arabidopsis lyrata
AL6G46190 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 21321785-21322784 Arabidopsis lyrata
AL6G46190 1.0kb downstream 1.0kb downstream 5293   true scaffold_6: 21316492-21321784 Arabidopsis lyrata
AL6G46190 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 21316492-21317491 Arabidopsis lyrata
AL6G46190 2.0kb upstream 2.0kb upstream 6293   true scaffold_6: 21317492-21323784 Arabidopsis lyrata
AL6G46190 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 21321785-21323784 Arabidopsis lyrata
AL6G46190 2.0kb downstream 2.0kb downstream 6293   true scaffold_6: 21315492-21321784 Arabidopsis lyrata
AL6G46190 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 21315492-21317491 Arabidopsis lyrata
AL6G46190 5.0kb upstream 5.0kb upstream 9293   true scaffold_6: 21317492-21326784 Arabidopsis lyrata
AL6G46190 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 21321785-21326784 Arabidopsis lyrata
AL6G46190 5.0kb downstream 5.0kb downstream 9293   true scaffold_6: 21312492-21321784 Arabidopsis lyrata
AL6G46190 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 21312492-21317491 Arabidopsis lyrata
AL6G46190 10.0kb upstream 10.0kb upstream 14293   true scaffold_6: 21317492-21331784 Arabidopsis lyrata
AL6G46190 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 21321785-21331784 Arabidopsis lyrata
AL6G46190 10.0kb downstream 10.0kb downstream 14293   true scaffold_6: 21307492-21321784 Arabidopsis lyrata
AL6G46190 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 21307492-21317491 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360645 5261 Brassicaceae View MSA
123834352 5264 Brassicales-Malvales View MSA
124337277 5266 SBM View MSA
124243471 5268 Malvidae View MSA
124071853 5270 Rosid View MSA
123744879 5271 Pentapetalae View MSA
122793721 5272 Eudicot View MSA
122045075 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain