Gene : AL6G43370 A. lyrata v2.1

Defline:  (1 of 3) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  3094
Name:  ? AL6G43370 Secondary Identifier:  ? PAC:35928910

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6358 Arabidopsis lyrata pathologic  
Alyrata PWY-6363 Arabidopsis lyrata pathologic  
Alyrata PWY-6364 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G43370 0.5kb upstream 0.5kb upstream 10263   true scaffold_6: 19690422-19700684 Arabidopsis lyrata
AL6G43370 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 19700185-19700684 Arabidopsis lyrata
AL6G43370 0.5kb downstream 0.5kb downstream 10263   true scaffold_6: 19689922-19700184 Arabidopsis lyrata
AL6G43370 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 19689922-19690421 Arabidopsis lyrata
AL6G43370 1.0kb upstream 1.0kb upstream 10763   true scaffold_6: 19690422-19701184 Arabidopsis lyrata
AL6G43370 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 19700185-19701184 Arabidopsis lyrata
AL6G43370 1.0kb downstream 1.0kb downstream 10763   true scaffold_6: 19689422-19700184 Arabidopsis lyrata
AL6G43370 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 19689422-19690421 Arabidopsis lyrata
AL6G43370 2.0kb upstream 2.0kb upstream 11763   true scaffold_6: 19690422-19702184 Arabidopsis lyrata
AL6G43370 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 19700185-19702184 Arabidopsis lyrata
AL6G43370 2.0kb downstream 2.0kb downstream 11763   true scaffold_6: 19688422-19700184 Arabidopsis lyrata
AL6G43370 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 19688422-19690421 Arabidopsis lyrata
AL6G43370 5.0kb upstream 5.0kb upstream 14763   true scaffold_6: 19690422-19705184 Arabidopsis lyrata
AL6G43370 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 19700185-19705184 Arabidopsis lyrata
AL6G43370 5.0kb downstream 5.0kb downstream 14763   true scaffold_6: 19685422-19700184 Arabidopsis lyrata
AL6G43370 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 19685422-19690421 Arabidopsis lyrata
AL6G43370 10.0kb upstream 10.0kb upstream 19763   true scaffold_6: 19690422-19710184 Arabidopsis lyrata
AL6G43370 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 19700185-19710184 Arabidopsis lyrata
AL6G43370 10.0kb downstream 10.0kb downstream 19763   true scaffold_6: 19680422-19700184 Arabidopsis lyrata
AL6G43370 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 19680422-19690421 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370213 5261 Brassicaceae View MSA
123839810 5264 Brassicales-Malvales View MSA
124339394 5266 SBM View MSA
124241049 5268 Malvidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain