Gene : AL7G11190 A. lyrata v2.1

Defline:  (1 of 3) PTHR10743:SF2 - PROTEIN RER1B-RELATED Genomic Order:  116
Name:  ? AL7G11190 Secondary Identifier:  ? PAC:35938060

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G11190 0.5kb upstream 0.5kb upstream 2720   true scaffold_7: 457130-459849 Arabidopsis lyrata
AL7G11190 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 457130-457629 Arabidopsis lyrata
AL7G11190 0.5kb downstream 0.5kb downstream 2720   true scaffold_7: 457630-460349 Arabidopsis lyrata
AL7G11190 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 459850-460349 Arabidopsis lyrata
AL7G11190 1.0kb upstream 1.0kb upstream 3220   true scaffold_7: 456630-459849 Arabidopsis lyrata
AL7G11190 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 456630-457629 Arabidopsis lyrata
AL7G11190 1.0kb downstream 1.0kb downstream 3220   true scaffold_7: 457630-460849 Arabidopsis lyrata
AL7G11190 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 459850-460849 Arabidopsis lyrata
AL7G11190 2.0kb upstream 2.0kb upstream 4220   true scaffold_7: 455630-459849 Arabidopsis lyrata
AL7G11190 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 455630-457629 Arabidopsis lyrata
AL7G11190 2.0kb downstream 2.0kb downstream 4220   true scaffold_7: 457630-461849 Arabidopsis lyrata
AL7G11190 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 459850-461849 Arabidopsis lyrata
AL7G11190 5.0kb upstream 5.0kb upstream 7220   true scaffold_7: 452630-459849 Arabidopsis lyrata
AL7G11190 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 452630-457629 Arabidopsis lyrata
AL7G11190 5.0kb downstream 5.0kb downstream 7220   true scaffold_7: 457630-464849 Arabidopsis lyrata
AL7G11190 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 459850-464849 Arabidopsis lyrata
AL7G11190 10.0kb upstream 10.0kb upstream 12220   true scaffold_7: 447630-459849 Arabidopsis lyrata
AL7G11190 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 447630-457629 Arabidopsis lyrata
AL7G11190 10.0kb downstream 10.0kb downstream 12220   true scaffold_7: 457630-469849 Arabidopsis lyrata
AL7G11190 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 459850-469849 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361086 5261 Brassicaceae View MSA
123841246 5264 Brassicales-Malvales View MSA
124338953 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain