Gene : AL970U10010 A. lyrata v2.1

Defline:  (1 of 2) PTHR13068//PTHR13068:SF22 - CGI-12 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? AL970U10010 Secondary Identifier:  ? PAC:35921719

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL970U10010 0.5kb upstream 0.5kb upstream 1317   true scaffold_970: 1-1317 Arabidopsis lyrata
AL970U10010 0.5kb upstream 0.5kb upstream 4   false scaffold_970: 1-4 Arabidopsis lyrata
AL970U10010 0.5kb downstream 0.5kb downstream 1813   true scaffold_970: 5-1817 Arabidopsis lyrata
AL970U10010 0.5kb downstream 0.5kb downstream 500   false scaffold_970: 1318-1817 Arabidopsis lyrata
AL970U10010 1.0kb upstream 1.0kb upstream 1317   true scaffold_970: 1-1317 Arabidopsis lyrata
AL970U10010 1.0kb upstream 1.0kb upstream 4   false scaffold_970: 1-4 Arabidopsis lyrata
AL970U10010 1.0kb downstream 1.0kb downstream 2313   true scaffold_970: 5-2317 Arabidopsis lyrata
AL970U10010 1.0kb downstream 1.0kb downstream 1000   false scaffold_970: 1318-2317 Arabidopsis lyrata
AL970U10010 2.0kb upstream 2.0kb upstream 1317   true scaffold_970: 1-1317 Arabidopsis lyrata
AL970U10010 2.0kb upstream 2.0kb upstream 4   false scaffold_970: 1-4 Arabidopsis lyrata
AL970U10010 2.0kb downstream 2.0kb downstream 3313   true scaffold_970: 5-3317 Arabidopsis lyrata
AL970U10010 2.0kb downstream 2.0kb downstream 2000   false scaffold_970: 1318-3317 Arabidopsis lyrata
AL970U10010 5.0kb upstream 5.0kb upstream 1317   true scaffold_970: 1-1317 Arabidopsis lyrata
AL970U10010 5.0kb upstream 5.0kb upstream 4   false scaffold_970: 1-4 Arabidopsis lyrata
AL970U10010 5.0kb downstream 5.0kb downstream 4150   true scaffold_970: 5-4154 Arabidopsis lyrata
AL970U10010 5.0kb downstream 5.0kb downstream 2837   false scaffold_970: 1318-4154 Arabidopsis lyrata
AL970U10010 10.0kb upstream 10.0kb upstream 1317   true scaffold_970: 1-1317 Arabidopsis lyrata
AL970U10010 10.0kb upstream 10.0kb upstream 4   false scaffold_970: 1-4 Arabidopsis lyrata
AL970U10010 10.0kb downstream 10.0kb downstream 4150   true scaffold_970: 5-4154 Arabidopsis lyrata
AL970U10010 10.0kb downstream 10.0kb downstream 2837   false scaffold_970: 1318-4154 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373529 5261 Brassicaceae View MSA
123830621 5264 Brassicales-Malvales View MSA
124342719 5266 SBM View MSA
124251019 5268 Malvidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain