Gene : AL7G19220 A. lyrata v2.1

Defline:  (1 of 4) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  891
Name:  ? AL7G19220 Secondary Identifier:  ? PAC:35938006

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWYDQC-4 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G19220 0.5kb upstream 0.5kb upstream 2638   true scaffold_7: 3767256-3769893 Arabidopsis lyrata
AL7G19220 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 3769394-3769893 Arabidopsis lyrata
AL7G19220 0.5kb downstream 0.5kb downstream 2638   true scaffold_7: 3766756-3769393 Arabidopsis lyrata
AL7G19220 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 3766756-3767255 Arabidopsis lyrata
AL7G19220 1.0kb upstream 1.0kb upstream 3138   true scaffold_7: 3767256-3770393 Arabidopsis lyrata
AL7G19220 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 3769394-3770393 Arabidopsis lyrata
AL7G19220 1.0kb downstream 1.0kb downstream 3138   true scaffold_7: 3766256-3769393 Arabidopsis lyrata
AL7G19220 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 3766256-3767255 Arabidopsis lyrata
AL7G19220 2.0kb upstream 2.0kb upstream 4138   true scaffold_7: 3767256-3771393 Arabidopsis lyrata
AL7G19220 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 3769394-3771393 Arabidopsis lyrata
AL7G19220 2.0kb downstream 2.0kb downstream 4138   true scaffold_7: 3765256-3769393 Arabidopsis lyrata
AL7G19220 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 3765256-3767255 Arabidopsis lyrata
AL7G19220 5.0kb upstream 5.0kb upstream 7138   true scaffold_7: 3767256-3774393 Arabidopsis lyrata
AL7G19220 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 3769394-3774393 Arabidopsis lyrata
AL7G19220 5.0kb downstream 5.0kb downstream 7138   true scaffold_7: 3762256-3769393 Arabidopsis lyrata
AL7G19220 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 3762256-3767255 Arabidopsis lyrata
AL7G19220 10.0kb upstream 10.0kb upstream 12138   true scaffold_7: 3767256-3779393 Arabidopsis lyrata
AL7G19220 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 3769394-3779393 Arabidopsis lyrata
AL7G19220 10.0kb downstream 10.0kb downstream 12138   true scaffold_7: 3757256-3769393 Arabidopsis lyrata
AL7G19220 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 3757256-3767255 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367253 5261 Brassicaceae View MSA
123799321 5264 Brassicales-Malvales View MSA
124296854 5266 SBM View MSA
124252107 5268 Malvidae View MSA
124066807 5270 Rosid View MSA
123736759 5271 Pentapetalae View MSA
122792944 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain