Gene : AL7G16560 A. lyrata v2.1

Defline:  (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) Genomic Order:  631
Name:  ? AL7G16560 Secondary Identifier:  ? PAC:35938061

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-2541 Arabidopsis lyrata pathologic  
Alyrata PWY-5670 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G16560 0.5kb upstream 0.5kb upstream 4045   true scaffold_7: 2687882-2691926 Arabidopsis lyrata
AL7G16560 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 2691427-2691926 Arabidopsis lyrata
AL7G16560 0.5kb downstream 0.5kb downstream 4045   true scaffold_7: 2687382-2691426 Arabidopsis lyrata
AL7G16560 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 2687382-2687881 Arabidopsis lyrata
AL7G16560 1.0kb upstream 1.0kb upstream 4545   true scaffold_7: 2687882-2692426 Arabidopsis lyrata
AL7G16560 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 2691427-2692426 Arabidopsis lyrata
AL7G16560 1.0kb downstream 1.0kb downstream 4545   true scaffold_7: 2686882-2691426 Arabidopsis lyrata
AL7G16560 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 2686882-2687881 Arabidopsis lyrata
AL7G16560 2.0kb upstream 2.0kb upstream 5545   true scaffold_7: 2687882-2693426 Arabidopsis lyrata
AL7G16560 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 2691427-2693426 Arabidopsis lyrata
AL7G16560 2.0kb downstream 2.0kb downstream 5545   true scaffold_7: 2685882-2691426 Arabidopsis lyrata
AL7G16560 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 2685882-2687881 Arabidopsis lyrata
AL7G16560 5.0kb upstream 5.0kb upstream 8545   true scaffold_7: 2687882-2696426 Arabidopsis lyrata
AL7G16560 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 2691427-2696426 Arabidopsis lyrata
AL7G16560 5.0kb downstream 5.0kb downstream 8545   true scaffold_7: 2682882-2691426 Arabidopsis lyrata
AL7G16560 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 2682882-2687881 Arabidopsis lyrata
AL7G16560 10.0kb upstream 10.0kb upstream 13545   true scaffold_7: 2687882-2701426 Arabidopsis lyrata
AL7G16560 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 2691427-2701426 Arabidopsis lyrata
AL7G16560 10.0kb downstream 10.0kb downstream 13545   true scaffold_7: 2677882-2691426 Arabidopsis lyrata
AL7G16560 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 2677882-2687881 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363626 5261 Brassicaceae View MSA
123827932 5264 Brassicales-Malvales View MSA
124340465 5266 SBM View MSA
124243687 5268 Malvidae View MSA
124065005 5270 Rosid View MSA
123747848 5271 Pentapetalae View MSA
122787825 5272 Eudicot View MSA
122042609 5273 Angiosperm View MSA
121351426 5274 Embryophyte View MSA
123424778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain