Protein Family : squalene synthase 1 124243687

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  22
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22 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30131.t000268 (1 of 1) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) R. communis v0.1 8291   30131: 1652982-1661272
orange1.1g015087m.g (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. sinensis v1.1 8097   scaffold00474: 15032-23128
AT4G34640 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase A. thaliana TAIR10 SQS1 3645   Chr4: 16538282-16541926
Thhalv10025338m.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase E. salsugineum v1.0 3815   scaffold_1: 2285479-2289293
Ciclev10028537m.g (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. clementina v1.0 7446   scaffold_8: 6315013-6322458
Lus10017499.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase L. usitatissimum v1.0 4189   scaffold1253: 258275-262463
Lus10028786.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase L. usitatissimum v1.0 4387   scaffold540: 263541-267927
Gorai.005G247700 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase G. raimondii v2.1 5719   Chr05: 62755408-62761126
Thecc1EG006798 (1 of 1) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) T. cacao v1.1 28808   scaffold_2: 3794466-3823273
Araha.10294s0012 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase A. halleri v1.1 3664   Scaffold10294: 44378-48041
Cagra.2350s0014 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase C. grandiflora v1.1 3771   Scaffold2350: 42430-46200
Brara.H01190 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase B. rapa FPsc v1.3 3349   A08: 13438744-13442092
Bostr.7867s1325 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase B. stricta v1.2 3765   Scaffold7867: 6733377-6737141
SapurV1A.0379s0070 (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) S. purpurea v1.0 5748   chr09: 10251729-10257476
SapurV1A.0091s0310 (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) S. purpurea v1.0 6053   chr04: 13955637-13961689
Manes.04G084600 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase M. esculenta v6.1 10610   Chromosome04: 22211658-22222267
AL7G16560 (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) A. lyrata v2.1 3545   scaffold_7: 2687882-2691426
Potri.004G161200 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase P. trichocarpa v3.1 5850   Chr04: 18167700-18173549
Potri.009G123100 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase P. trichocarpa v3.1 6078   Chr09: 10257359-10263436
Podel.04G165100 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase P. deltoides WV94 v2.1 5707   Chr04: 17888879-17894585
Podel.09G128500 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase P. deltoides WV94 v2.1 5755   Chr09: 10578376-10584130
Carub.0007s0564 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase C. rubella v1.1 3592   scaffold_7: 2122677-2126268

22 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g015087m C. sinensis v1.1 124243687 squalene synthase 1 1 5268 Malvidae
AT4G34640.1 A. thaliana TAIR10 124243687 squalene synthase 1 1 5268 Malvidae
Thhalv10025338m E. salsugineum v1.0 124243687 squalene synthase 1 1 5268 Malvidae
Lus10017499 L. usitatissimum v1.0 124243687 squalene synthase 1 2 5268 Malvidae
Gorai.005G247700.1 G. raimondii v2.1 124243687 squalene synthase 1 1 5268 Malvidae
Thecc1EG006798t1 T. cacao v1.1 124243687 squalene synthase 1 1 5268 Malvidae
Potri.004G161200.7.p P. trichocarpa v3.1 124243687 squalene synthase 1 2 5268 Malvidae
Podel.04G165100.1.p P. deltoides WV94 v2.1 124243687 squalene synthase 1 2 5268 Malvidae
30131.m007117 R. communis v0.1 124243687 squalene synthase 1 1 5268 Malvidae
Ciclev10028537m C. clementina v1.0 124243687 squalene synthase 1 1 5268 Malvidae
Lus10028786 L. usitatissimum v1.0 124243687 squalene synthase 1 2 5268 Malvidae
Araha.10294s0012.1.p A. halleri v1.1 124243687 squalene synthase 1 1 5268 Malvidae
Cagra.2350s0014.1.p C. grandiflora v1.1 124243687 squalene synthase 1 1 5268 Malvidae
Brara.H01190.1.p B. rapa FPsc v1.3 124243687 squalene synthase 1 1 5268 Malvidae
Bostr.7867s1325.1.p B. stricta v1.2 124243687 squalene synthase 1 1 5268 Malvidae
SapurV1A.0379s0070.1.p S. purpurea v1.0 124243687 squalene synthase 1 2 5268 Malvidae
SapurV1A.0091s0310.1.p S. purpurea v1.0 124243687 squalene synthase 1 2 5268 Malvidae
Manes.04G084600.1.p M. esculenta v6.1 124243687 squalene synthase 1 1 5268 Malvidae
AL7G16560.t1 A. lyrata v2.1 124243687 squalene synthase 1 1 5268 Malvidae
Potri.009G123100.1.p P. trichocarpa v3.1 124243687 squalene synthase 1 2 5268 Malvidae
Podel.09G128500.1.p P. deltoides WV94 v2.1 124243687 squalene synthase 1 2 5268 Malvidae
Carub.0007s0564.1.p C. rubella v1.1 124243687 squalene synthase 1 1 5268 Malvidae