Gene : Podel.09G128500 P. deltoides WV94 v2.1
Defline:  (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase Genomic Order:  1285
Name:  ? Podel.09G128500 Secondary Identifier:  ? PAC:37286548
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-2541 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5670 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.09G128500 0.5kb upstream 0.5kb upstream 6255 true Chr09: 10577876-10584130 Populus deltoides WV94
Podel.09G128500 0.5kb upstream 0.5kb upstream 500 false Chr09: 10577876-10578375 Populus deltoides WV94
Podel.09G128500 0.5kb downstream 0.5kb downstream 6255 true Chr09: 10578376-10584630 Populus deltoides WV94
Podel.09G128500 0.5kb downstream 0.5kb downstream 500 false Chr09: 10584131-10584630 Populus deltoides WV94
Podel.09G128500 1.0kb upstream 1.0kb upstream 6755 true Chr09: 10577376-10584130 Populus deltoides WV94
Podel.09G128500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10577376-10578375 Populus deltoides WV94
Podel.09G128500 1.0kb downstream 1.0kb downstream 6755 true Chr09: 10578376-10585130 Populus deltoides WV94
Podel.09G128500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10584131-10585130 Populus deltoides WV94
Podel.09G128500 2.0kb upstream 2.0kb upstream 7755 true Chr09: 10576376-10584130 Populus deltoides WV94
Podel.09G128500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10576376-10578375 Populus deltoides WV94
Podel.09G128500 2.0kb downstream 2.0kb downstream 7755 true Chr09: 10578376-10586130 Populus deltoides WV94
Podel.09G128500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10584131-10586130 Populus deltoides WV94
Podel.09G128500 5.0kb upstream 5.0kb upstream 10755 true Chr09: 10573376-10584130 Populus deltoides WV94
Podel.09G128500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10573376-10578375 Populus deltoides WV94
Podel.09G128500 5.0kb downstream 5.0kb downstream 10755 true Chr09: 10578376-10589130 Populus deltoides WV94
Podel.09G128500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10584131-10589130 Populus deltoides WV94
Podel.09G128500 10.0kb upstream 10.0kb upstream 15755 true Chr09: 10568376-10584130 Populus deltoides WV94
Podel.09G128500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10568376-10578375 Populus deltoides WV94
Podel.09G128500 10.0kb downstream 10.0kb downstream 15755 true Chr09: 10578376-10594130 Populus deltoides WV94
Podel.09G128500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10584131-10594130 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122433750 5262 Malpighiales View MSA
124243687 5268 Malvidae View MSA
124065005 5270 Rosid View MSA
123747848 5271 Pentapetalae View MSA
122787825 5272 Eudicot View MSA
122042609 5273 Angiosperm View MSA
121351426 5274 Embryophyte View MSA
123424778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier