Gene : orange1.1g015087m.g C. sinensis v1.1
Defline:  (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase Genomic Order:  3
Name:  ? orange1.1g015087m.g Secondary Identifier:  ? PAC:18110980
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-2541 Citrus sinensis pathologic  
Csinensis PWY-5670 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g015087m.g 0.5kb upstream 0.5kb upstream 8597 true scaffold00474: 15032-23628 Citrus sinensis
orange1.1g015087m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00474: 23129-23628 Citrus sinensis
orange1.1g015087m.g 0.5kb downstream 0.5kb downstream 8597 true scaffold00474: 14532-23128 Citrus sinensis
orange1.1g015087m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00474: 14532-15031 Citrus sinensis
orange1.1g015087m.g 1.0kb upstream 1.0kb upstream 9097 true scaffold00474: 15032-24128 Citrus sinensis
orange1.1g015087m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00474: 23129-24128 Citrus sinensis
orange1.1g015087m.g 1.0kb downstream 1.0kb downstream 9097 true scaffold00474: 14032-23128 Citrus sinensis
orange1.1g015087m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00474: 14032-15031 Citrus sinensis
orange1.1g015087m.g 2.0kb upstream 2.0kb upstream 10097 true scaffold00474: 15032-25128 Citrus sinensis
orange1.1g015087m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00474: 23129-25128 Citrus sinensis
orange1.1g015087m.g 2.0kb downstream 2.0kb downstream 10097 true scaffold00474: 13032-23128 Citrus sinensis
orange1.1g015087m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00474: 13032-15031 Citrus sinensis
orange1.1g015087m.g 5.0kb upstream 5.0kb upstream 13097 true scaffold00474: 15032-28128 Citrus sinensis
orange1.1g015087m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00474: 23129-28128 Citrus sinensis
orange1.1g015087m.g 5.0kb downstream 5.0kb downstream 13097 true scaffold00474: 10032-23128 Citrus sinensis
orange1.1g015087m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00474: 10032-15031 Citrus sinensis
orange1.1g015087m.g 10.0kb upstream 10.0kb upstream 18097 true scaffold00474: 15032-33128 Citrus sinensis
orange1.1g015087m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00474: 23129-33128 Citrus sinensis
orange1.1g015087m.g 10.0kb downstream 10.0kb downstream 18097 true scaffold00474: 5032-23128 Citrus sinensis
orange1.1g015087m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00474: 5032-15031 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340465 5266 SBM View MSA
124243687 5268 Malvidae View MSA
124065005 5270 Rosid View MSA
123747848 5271 Pentapetalae View MSA
122787825 5272 Eudicot View MSA
122042609 5273 Angiosperm View MSA
121351426 5274 Embryophyte View MSA
123424778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain