Gene : Podel.04G165100 P. deltoides WV94 v2.1
Defline:  (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase Genomic Order:  1651
Name:  ? Podel.04G165100 Secondary Identifier:  ? PAC:37290789
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-2541 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5670 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.04G165100 0.5kb upstream 0.5kb upstream 6207 true Chr04: 17888379-17894585 Populus deltoides WV94
Podel.04G165100 0.5kb upstream 0.5kb upstream 500 false Chr04: 17888379-17888878 Populus deltoides WV94
Podel.04G165100 0.5kb downstream 0.5kb downstream 6207 true Chr04: 17888879-17895085 Populus deltoides WV94
Podel.04G165100 0.5kb downstream 0.5kb downstream 500 false Chr04: 17894586-17895085 Populus deltoides WV94
Podel.04G165100 1.0kb upstream 1.0kb upstream 6707 true Chr04: 17887879-17894585 Populus deltoides WV94
Podel.04G165100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 17887879-17888878 Populus deltoides WV94
Podel.04G165100 1.0kb downstream 1.0kb downstream 6707 true Chr04: 17888879-17895585 Populus deltoides WV94
Podel.04G165100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 17894586-17895585 Populus deltoides WV94
Podel.04G165100 2.0kb upstream 2.0kb upstream 7707 true Chr04: 17886879-17894585 Populus deltoides WV94
Podel.04G165100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 17886879-17888878 Populus deltoides WV94
Podel.04G165100 2.0kb downstream 2.0kb downstream 7707 true Chr04: 17888879-17896585 Populus deltoides WV94
Podel.04G165100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 17894586-17896585 Populus deltoides WV94
Podel.04G165100 5.0kb upstream 5.0kb upstream 10707 true Chr04: 17883879-17894585 Populus deltoides WV94
Podel.04G165100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 17883879-17888878 Populus deltoides WV94
Podel.04G165100 5.0kb downstream 5.0kb downstream 10707 true Chr04: 17888879-17899585 Populus deltoides WV94
Podel.04G165100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 17894586-17899585 Populus deltoides WV94
Podel.04G165100 10.0kb upstream 10.0kb upstream 15707 true Chr04: 17878879-17894585 Populus deltoides WV94
Podel.04G165100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 17878879-17888878 Populus deltoides WV94
Podel.04G165100 10.0kb downstream 10.0kb downstream 15707 true Chr04: 17888879-17904585 Populus deltoides WV94
Podel.04G165100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 17894586-17904585 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122433750 5262 Malpighiales View MSA
124243687 5268 Malvidae View MSA
124065005 5270 Rosid View MSA
123747848 5271 Pentapetalae View MSA
122787825 5272 Eudicot View MSA
122042609 5273 Angiosperm View MSA
121351426 5274 Embryophyte View MSA
123424778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier